RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TBC1D20Q96BZ9 403 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 NEDD4LQ96PU5 975 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 MAP3K3Q99759 626 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 LMF2Q9BU23 707 aaKnown RBP16.33■□□□□ 0.2
PHRF1-202ENST00000413872 PHF7Q9BWX1 381 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-202ENST00000413872 CXCL10P02778 98 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 PRH1P02810 166 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 ANXA3P12429 323 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 ANKDD1AQ495B1 522 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 PMM1Q92871 262 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 SMURF1Q9HCE7 757 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 ERVK-19Q9WJR5 959 aa16.33■□□□□ 0.2
PHRF1-202ENST00000413872 XPNPEP2O43895 674 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 HMGN2P05204 90 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 MELKQ14680 651 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 SPHARQ15513 63 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 HMGN2P46Q86SG4 172 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 TRUB1Q8WWH5 349 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 INPP5KQ9BT40 448 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 CUTCQ9NTM9 273 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 FAM118AQ9NWS6 357 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 PIGBOS1A0A0B4J2F0 54 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 DAP3P51398 398 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 BNIP3Q12983 259 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 C3P1Q6ZMU1 363 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 IL17RCQ8NAC3 791 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 ARG2P78540 354 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 VTCN1Q7Z7D3 282 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 TMEM173Q86WV6 379 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 ASB16Q96NS5 453 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 FUZQ9BT04 418 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 TRBV2A0A0J9YWF9 115 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 H3BSA7 217 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 FANCGO15287 622 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 SNAPC5O75971 98 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 THBS2P35442 1172 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 RACK1P63244 317 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 LEG1Q6P5S2 330 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 ULK3Q6PHR2 472 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF534Q76KX8 674 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 CNIH3Q8TBE1 160 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 KATNBL1Q9H079 304 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 ENAMQ9NRM1 1142 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 MCTS1Q9ULC4 181 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 PHIPQ8WWQ0 1821 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 COL18A1P39060 1754 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 PRKYO43930 277 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 KCNK5O95279 499 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 HMGA1P17096 107 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 HOXB9P17482 250 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 CSNK2A1P68400 391 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 EEF1A1P5Q5VTE0 462 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 EID2Q8N6I1 236 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 MAL2Q969L2 176 aa16.32■□□□□ 0.2
PHRF1-202ENST00000413872 FAM46AQ96IP4 442 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 NXT1Q9UKK6 140 aaKnown RBP16.32■□□□□ 0.2
PHRF1-202ENST00000413872 BMP2P12643 396 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 MTNR1AP48039 350 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 RNF144AP50876 292 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-202ENST00000413872 SEMA3BQ13214 749 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 CEACAM19Q7Z692 300 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 CIDECQ96AQ7 238 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-202ENST00000413872 MGLLQ99685 303 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 ARMC1Q9NVT9 282 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 NSG1A0A0A6YYJ2 146 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 RFXAPO00287 272 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 VAMP1P23763 118 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 UGT2B10P36537 528 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 FOXA1P55317 472 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 MOGQ16653 247 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 PRAMEF8Q5VWM4 474 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 PRAMEF7Q5VXH5 474 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 ABHD12BQ7Z5M8 362 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-202ENST00000413872 GPX3P22352 226 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 MICAQ29983 383 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 DCST2Q5T1A1 773 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 MARVELD2Q8N4S9 558 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 C12orf43Q96C57 262 aaKnown RBP16.31■□□□□ 0.2
PHRF1-202ENST00000413872 HDHD5Q9BXW7 423 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 PCDHGA7Q9Y5G6 932 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 H0YIV9 168 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 LRRTM2O43300 516 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 CLIC3O95833 236 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 CD3GP09693 182 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 CPMP14384 443 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 ELK4P28324 431 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 ARL6IP1Q15041 203 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF77Q15935 545 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 RUNDC3AQ59EK9 446 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
PHRF1-202ENST00000413872 OR8H1Q8NGG4 311 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 OR14A16Q8NHC5 309 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 BTBD2Q9BX70 525 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 TTTY10Q9BZA0 68 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 PCDHGA10Q9Y5H3 936 aa16.31■□□□□ 0.2
PHRF1-202ENST00000413872 TNFRSF10CO14798 259 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 IRF2P14316 349 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms