RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SUCLG1P53597 346 aaKnown RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 TPD52P55327 224 aaPredicted RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 DSCR4P56555 118 aaPredicted RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 CORO7P57737 925 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 TRA2BP62995 288 aaKnown RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 EFR3AQ14156 821 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 ZDHHC24Q6UX98 284 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 ZNF550Q7Z398 422 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 PLD6Q8N2A8 252 aaKnown RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 CNEP1R1Q8N9A8 125 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 FBXO25Q8TCJ0 367 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 CAVIN3Q969G5 261 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 KLHL29Q96CT2 875 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 DTNBP1Q96EV8 351 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 ANKRA2Q9H9E1 313 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 FARSBQ9NSD9 589 aaKnown RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 CPSF2Q9P2I0 782 aaKnown RBP10.96□□□□□ -0.65
LIMS2-210ENST00000413578 ZNF225Q9UK10 706 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 DKKL1Q9UK85 242 aa10.96□□□□□ -0.65
LIMS2-210ENST00000413578 USF3Q68DE3 2245 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PPP6CO00743 305 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 KLF4O43474 513 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 CRLF1O75462 422 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 BCAS2O75934 225 aaPredicted RBP10.95□□□□□ -0.66
LIMS2-210ENST00000413578 SOX30O94993 753 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PDYNP01213 254 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 THBDP07204 575 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 RPS17P08708 135 aaKnown RBP10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PEPDP12955 493 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PNLIPRP2P54317 469 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 GNG11P61952 73 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 SIRPAP78324 504 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PSPHP78330 225 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PPP2R2BQ00005 443 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 OCRLQ01968 901 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 IFT88Q13099 833 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 TRADDQ15628 312 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 FAM219BQ5XKK7 198 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 TTC19Q6DKK2 380 aaPredicted RBP10.95□□□□□ -0.66
LIMS2-210ENST00000413578 LETMD1Q6P1Q0 360 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 KLC3Q6P597 504 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 P4HA3Q7Z4N8 544 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 OR4F6Q8NGB9 312 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 ATP6V1E2Q96A05 226 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PHF21BQ96EK2 531 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF845Q96IR2 970 aaPredicted RBP10.95□□□□□ -0.66
LIMS2-210ENST00000413578 SLC39A3Q9BRY0 314 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 ELOVL6Q9H5J4 265 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 BRF2Q9HAW0 419 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 PSME2Q9UL46 239 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 SLC12A4Q9UP95 1085 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF175Q9Y473 711 aa10.95□□□□□ -0.66
LIMS2-210ENST00000413578 MXRA5Q9NR99 2828 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.94□□□□□ -0.66
LIMS2-210ENST00000413578 FADS1O60427 444 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 TMCC2O75069 709 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 TCEA1P23193 301 aaKnown RBP10.94□□□□□ -0.66
LIMS2-210ENST00000413578 SERPINB8P50452 374 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 PLTPP55058 493 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 CAV1Q03135 178 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 FGFBP1Q14512 234 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 SGO1Q5FBB7 561 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 LARP4Q71RC2 724 aaKnown RBP eCLIP10.94□□□□□ -0.66
LIMS2-210ENST00000413578 RPS27LQ71UM5 84 aaKnown RBP10.94□□□□□ -0.66
LIMS2-210ENST00000413578 MILR1Q7Z6M3 343 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 UBQLNLQ8IYU4 475 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 CCDC116Q8IYX3 515 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 MEIOBQ8N635 442 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 C1orf52Q8N6N3 182 aaKnown RBP10.94□□□□□ -0.66
LIMS2-210ENST00000413578 METTL25Q8N6Q8 603 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF610Q8N9Z0 462 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 OR2M3Q8NG83 312 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 OR4N2Q8NGD1 307 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 OR9A2Q8NGT5 310 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 FNDC9Q8TBE3 224 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF483Q8TF39 744 aaPredicted RBP10.94□□□□□ -0.66
LIMS2-210ENST00000413578 TMEM204Q9BSN7 226 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 FAIM2Q9BWQ8 316 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 C1QTNF3Q9BXJ4 246 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 PINK1Q9BXM7 581 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 RTN4RQ9BZR6 473 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 FOLH1BQ9HBA9 442 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 MCM8Q9UJA3 840 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 UTS2RQ9UKP6 389 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF337Q9Y3M9 751 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 ZNF780BQ9Y6R6 833 aa10.94□□□□□ -0.66
LIMS2-210ENST00000413578 RTTNQ86VV8 2226 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 OR2M5A3KFT3 312 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 LINC01387J3KSC0 135 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 PLOD3O60568 738 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 AQP8O94778 261 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 RBP1P09455 135 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 SBK3P0C264 359 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 TBXA2RP21731 343 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 TYK2P29597 1187 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 EVI2BP34910 448 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
LIMS2-210ENST00000413578 CLDN20P56880 219 aa10.93□□□□□ -0.66
LIMS2-210ENST00000413578 EEFSECP57772 596 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms