RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CRHP06850 196 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 TPOP07202 933 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CHRNGP07510 517 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ALOX5P09917 674 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 GDF1P27539 372 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 PTPN6P29350 595 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 SRD5A2P31213 254 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 SOX18P35713 384 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 MAGEA5P43359 124 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 DNASE1L1P49184 302 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CDK9P50750 372 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 DSCR4P56555 118 aaPredicted RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 FBXW4P57775 412 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 GPR85P60893 370 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 RPL38P63173 70 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 PSG6Q00889 435 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 PMP22Q01453 160 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 GAB1Q13480 694 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CASP8Q14790 479 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 EXOSC7Q15024 291 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 HSPB2Q16082 182 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 C3AR1Q16581 482 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP54-202ENST00000413442 GALNTL6Q49A17 601 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 RIPPLY2Q5TAB7 128 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 IL23RQ5VWK5 629 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 B3GNT6Q6ZMB0 384 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 C16orf47Q6ZP98 133 aaPredicted RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 LARP4Q71RC2 724 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP54-202ENST00000413442 LACC1Q8IV20 430 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 WDR75Q8IWA0 830 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 SLC44A2Q8IWA5 706 aaPredicted RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 CHERPQ8IWX8 916 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 RIMKLAQ8IXN7 391 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ZNF527Q8NB42 609 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 NUP43Q8NFH3 380 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ADCY4Q8NFM4 1077 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 OR7G2Q8NG99 324 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 OR56A1Q8NGH5 318 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 OR9A2Q8NGT5 310 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 PIWIL2Q8TC59 973 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 SFXN5Q8TD22 340 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ACTRT2Q8TDY3 377 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CA5BP1Q8WTZ4 195 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ITLN2Q8WWU7 325 aaPredicted RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 STON2Q8WXE9 905 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 UCN3Q969E3 161 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ARL8AQ96BM9 186 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 TLCD1Q96CP7 247 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 CCDC120Q96HB5 630 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 EGLN2Q96KS0 407 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 MS4A4EQ96PG1 132 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 SPOCK3Q9BQ16 436 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 OSBPL11Q9BXB4 747 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ITPAQ9BY32 194 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 PRDM14Q9GZV8 571 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 C12orf65Q9H3J6 166 aaKnown RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 PIGUQ9H490 435 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 EXO5Q9H790 373 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ZNF703Q9H7S9 590 aaPredicted RBP5.85□□□□□ -1.47
USP54-202ENST00000413442 MANSC1Q9H8J5 431 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 MEAF6Q9HAF1 191 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 KCNJ16Q9NPI9 418 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 POLE3Q9NRF9 147 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 UBQLN4Q9NRR5 601 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 KLRF1Q9NZS2 232 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 C15orf41Q9Y2V0 281 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 HIVEP3Q5T1R4 2406 aa5.85□□□□□ -1.47
USP54-202ENST00000413442 ATP6AP2A0A1C7CYW4 349 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TMEM120BA0PK00 339 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 PRAMEF25A6NGN4 478 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 HMGB1P1B2RPK0 211 aaPredicted RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 H3BNH8 94 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 PYCARD-AS1I3L0S3 204 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ADAM10O14672 748 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 FADS1O60427 444 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ZG16O60844 167 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 UGT2B11O75310 529 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 SNNO75324 88 aaPredicted RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 ATP6AP2O75787 350 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TRAPPC6AO75865 159 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 IL18BPO95998 194 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 IL2RAP01589 272 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 IL6P05231 212 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 PEPDP12955 493 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 IDO1P14902 403 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 HPGDP15428 266 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 CREB1P16220 341 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 CAPN3P20807 821 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TBXA2RP21731 343 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TACR1P25103 407 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ADH6P28332 368 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 PTGER1P34995 402 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ADH7P40394 386 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 EIF1P41567 113 aaKnown RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 MC3RP41968 323 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ZFP36L2P47974 494 aaKnown RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 CCT3P49368 545 aaKnown RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 MRPS35P82673 323 aaKnown RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 RCAN2Q14206 197 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms