RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 GORASP2Q9H8Y8 452 aa3.91□□□□□ -1.78
HMGB3P31-201ENST00000413333 POLD4Q9HCU8 107 aa3.91□□□□□ -1.78
HMGB3P31-201ENST00000413333 UTP6Q9NYH9 597 aaKnown RBP3.91□□□□□ -1.78
HMGB3P31-201ENST00000413333 CIDEBQ9UHD4 219 aa3.91□□□□□ -1.78
HMGB3P31-201ENST00000413333 KDRP35968 1356 aa3.9□□□□□ -1.78
HMGB3P31-201ENST00000413333 CARMIL1Q5VZK9 1371 aa3.9□□□□□ -1.78
HMGB3P31-201ENST00000413333 SYNJ2BP-COX16A0A087WUM0 186 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRABD2BA6NFA1 517 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 C11orf98E9PRG8 122 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 PDLIM1O00151 329 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 DUX1O43812 170 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 NEBLO76041 1014 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 HOXB7P09629 217 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 HOXB6P17509 224 aaKnown RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 GLRA2P23416 452 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 MAGEA5P43359 124 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 POU3F4P49335 361 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 ACADVLP49748 655 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 RGS4P49798 205 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 METAP1P53582 386 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPIBQ01892 262 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 ACY1Q03154 408 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF85Q03923 595 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 CD300CQ08708 224 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 PJVKQ0ZLH3 352 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 LY6DQ14210 128 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 CHI3L2Q15782 390 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 CNPY1Q3B7I2 92 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 SCYL2Q6P3W7 929 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 STOX1Q6ZVD7 989 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 DPY19L4Q7Z388 723 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 VASH2Q86V25 355 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF491Q8N8L2 437 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 OR5AU1Q8NGC0 362 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 OR52M1Q8NGK5 317 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 OR2T3Q8NH03 318 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 MIPOL1Q8TD10 442 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC15Q8TF66 581 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF606Q8WXB4 792 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 DNAJA3Q96EY1 480 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 MCRIP2Q9BUT9 160 aaKnown RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 NFKBIZQ9BYH8 718 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 POLR1EQ9GZS1 481 aaKnown RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 GPN2Q9H9Y4 310 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF446Q9NWS9 450 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 RCOR3Q9P2K3 495 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 XPO7Q9UIA9 1087 aaKnown RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 RABL2BQ9UNT1 228 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 OR10H1Q9Y4A9 318 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 KIF16BQ96L93 1317 aa3.9□□□□□ -1.79
HMGB3P31-201ENST00000413333 RPL37AP8A6NKH3 93 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 PPIAL4DF5H284 164 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 CLDN5O00501 218 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 OR1F1O43749 312 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 IGFBP1P08833 259 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 IQCF3P0C7M6 154 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 DPEP1P16444 411 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 PSMA2P25787 234 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 LMO2P25791 158 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 OTX2P32243 289 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF33BQ06732 778 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 CHIT1Q13231 466 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 SELPLGQ14242 412 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 TMEM44Q2T9K0 475 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC23Q53EV4 343 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 REP15Q6BDI9 236 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 ARMCX5Q6P1M9 558 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 EMBQ6PCB8 327 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 LANCL3Q6ZV70 420 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 CTNNBL1Q8WYA6 563 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 N4BP2L2Q92802 583 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 TAF15Q92804 592 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 CASD1Q96PB1 797 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 ATF6BQ99941 703 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC61Q9BV99 259 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 NT5C3AQ9H0P0 336 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 TUBB1Q9H4B7 451 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 JPT2Q9H910 190 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 ABCC13Q9NSE7 274 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 SMPD3Q9NY59 655 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPATA2Q9UM82 520 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 SMC3Q9UQE7 1217 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 RNF6Q9Y252 685 aa3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 EXOSC1Q9Y3B2 195 aaKnown RBP3.89□□□□□ -1.79
HMGB3P31-201ENST00000413333 PPIAL4CA0A0B4J2A2 164 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 A0A1B0GTH9 108 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 GSAPA4D1B5 854 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 PPIHO43447 177 aaKnown RBP3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 TYROBPO43914 113 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 BCAS1O75363 584 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 STX11O75558 287 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 RHOBTB1O94844 696 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 SEMA4FO95754 770 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 MT-ND1P03886 318 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 HCKP08631 526 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 PPIAL4GP0DN37 164 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 GSK3BP49841 420 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 STK19P49842 368 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms