RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RAB4BP61018 213 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 PDSS1Q5T2R2 415 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR2T5Q6IEZ7 315 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 POMZP3Q6PJE2 187 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 DPP10Q8N608 796 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR2T29Q8NH02 315 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF671Q8TAW3 534 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 RAB2BQ8WUD1 216 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 GPN1Q9HCN4 374 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 NECTIN3Q9NQS3 549 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 TMEM9Q9P0T7 183 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 EI24O14681 340 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 TLX3O43711 291 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 AIFM1O95831 613 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 C1QAP02745 245 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OPN1SWP03999 348 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 DBIP07108 87 aaKnown RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 RETP07949 1114 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 GSTM3P21266 225 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 GSSP48637 474 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 XKR7Q5GH72 579 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 SLC5A8Q8N695 610 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 HORMAD2Q8N7B1 307 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR52E4Q8NGH9 312 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 OR14A16Q8NHC5 309 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 HMGCLL1Q8TB92 370 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 NECAB3Q96P71 396 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 NODALQ96S42 347 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 ZPBPQ9BS86 351 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 DCUN1D5Q9BTE7 237 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 MTHFD2LQ9H903 347 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-211ENST00000413186 PCOLCE2Q9UKZ9 415 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 LYVE1Q9Y5Y7 322 aa8.03□□□□□ -1.12
SYNE1-211ENST00000413186 RBMXL2O75526 392 aaKnown RBP8.02□□□□□ -1.12
SYNE1-211ENST00000413186 OR1D4P47884 311 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 GK3PQ14409 553 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 UGT3A2Q3SY77 523 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 HSDL2Q6YN16 418 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 C9orf43Q8TAL5 461 aaPredicted RBP8.02□□□□□ -1.12
SYNE1-211ENST00000413186 FAM110BQ8TC76 370 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 MAFIPQ8WZ33 124 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 BORCS5Q969J3 196 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 ARHGAP9Q9BRR9 750 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 C5AR2Q9P296 337 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 B4GALT7Q9UBV7 327 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 OAZ3Q9UMX2 235 aa8.02□□□□□ -1.12
SYNE1-211ENST00000413186 FAM149AA5PLN7 773 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 XKRYO14609 159 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 CTNSO60931 367 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 TGM6O95932 706 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 CSTAP01040 98 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 TSPAN19P0C672 248 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 HSD17B7P56937 341 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 EIF3IQ13347 325 aaKnown RBP8.02□□□□□ -1.13
SYNE1-211ENST00000413186 VEZF1Q14119 521 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 TAB1Q15750 504 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 BTBD16Q32M84 506 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 PDZK1Q5T2W1 519 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ABHD17BQ5VST6 288 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF227Q86WZ6 799 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 NAGSQ8N159 534 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 OR52J3Q8NH60 311 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 MS4A6EQ96DS6 147 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 EGLN2Q96KS0 407 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 GIN1Q9NXP7 522 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 TMPRSS11EQ9UL52 423 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 PPT2Q9UMR5 302 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 PCDHB14Q9Y5E9 798 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 NCOR1O75376 2440 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 MDFIC2A0A1B0GVS7 189 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 A6NCN8 305 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 NSA2O95478 260 aaKnown RBP8.02□□□□□ -1.13
SYNE1-211ENST00000413186 BMP2P12643 396 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF41P51814 821 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-211ENST00000413186 RAB25P57735 213 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 RAB5BP61020 215 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 FAM53BQ14153 422 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF846Q147U1 533 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 SPRED3Q2MJR0 410 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 LYRM7Q5U5X0 104 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 PMM1Q92871 262 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 MAPKAP1Q9BPZ7 522 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 EVA1AQ9H8M9 152 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ST14Q9Y5Y6 855 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 URB1O60287 2271 aaKnown RBP8.02□□□□□ -1.13
SYNE1-211ENST00000413186 C2orf92A0A1B0GVN3 265 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 C8BP07358 591 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF24P17028 368 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 S100GP29377 79 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 MC3RP41968 323 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 YAP1P46937 504 aaKnown RBP8.02□□□□□ -1.13
SYNE1-211ENST00000413186 GPR19Q15760 415 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ZBED5Q49AG3 693 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 RNF220Q5VTB9 566 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 GPR107Q5VW38 600 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 LRRC69Q6ZNQ3 347 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 PTCHD4Q6ZW05 846 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 OR9A2Q8NGT5 310 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 FOXN4Q96NZ1 517 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms