RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SSSCA1O60232 199 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 JAK2O60674 1132 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SDC3O75056 442 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 NPIPB7O75200 414 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 DDAH1O94760 285 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 DDX58O95786 925 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCNE2O96020 404 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC3A2P08195 630 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MYZAPP0CAP1 466 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CSF2RAP15509 400 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZP3P21754 424 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CYP3A7P24462 503 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 NDUFS1P28331 727 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ERCC5P28715 1186 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SOAT1P35610 550 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HNF1BP35680 557 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARL1P40616 181 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 AKR1C3P42330 323 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 PIK3CAP42336 1068 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LSSP48449 732 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 KCNJ3P48549 501 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HCAR3P49019 387 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MTHFSP49914 203 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCR3P51677 355 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MFAP4P55083 255 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HAND2P61296 217 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 FOLH1Q04609 750 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LOXL1Q08397 574 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 EFR3AQ14156 821 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CEBPEQ15744 281 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRRC26Q2I0M4 334 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 KIAA0753Q2KHM9 967 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CEACAM21Q3KPI0 293 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 GAGE2EQ4V326 116 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC93Q567U6 631 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MUM1L1Q5H9M0 696 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 FBXO47Q5MNV8 452 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 EOGTQ5NDL2 527 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TIMM23BQ5SRD1 257 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPATCH4Q5T3I0 446 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRRC38Q5VT99 294 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TXNDC8Q6A555 127 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 APOBEC3HQ6NTF7 200 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 C3P1Q6ZMU1 363 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LINC00322Q6ZN03 302 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 RNF165Q6ZSG1 346 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MOB1BQ7L9L4 216 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC16A14Q7RTX9 510 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HEATR3Q7Z4Q2 680 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 GALNT7Q86SF2 657 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LDB1Q86U70 411 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARHGAP12Q8IWW6 846 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MICU2Q8IYU8 434 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 NDUFAF2Q8N183 169 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPRMLQ8N4K4 120 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CSNK1A1LQ8N752 337 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 EXD3Q8N9H8 876 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRRC57Q8N9N7 239 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 DRAXINQ8NBI3 349 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC38A9Q8NBW4 561 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 BEST4Q8NFU0 473 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR52B6Q8NGF0 335 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR9A2Q8NGT5 310 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR5W2Q8NH69 310 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAGEC3Q8TD91 643 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ASB13Q8WXK3 278 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HSD17B8Q92506 261 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP6V0A1Q93050 837 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 KIAA1191Q96A73 305 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC25A46Q96AG3 418 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZBTB10Q96DT7 871 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SHDQ96IW2 340 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ITCHQ96J02 903 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TBATAQ96M53 351 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 RHOXF2Q9BQY4 288 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 NICN1Q9BSH3 213 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 DESI2Q9BSY9 194 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 HCAR1Q9BXC0 346 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CADM1Q9BY67 442 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 GTPBP4Q9BZE4 634 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLMPQ9H6B4 373 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TDRD3Q9H7E2 651 aaKnown RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SP140LQ9H930 580 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CALHM2Q9HA72 323 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRIM36Q9NQ86 728 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ASAH2Q9NR71 780 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC38A7Q9NVC3 462 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLCF1Q9UBD9 225 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 UPB1Q9UBR1 384 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 MIOXQ9UGB7 285 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR12D3Q9UGF7 316 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CIDEBQ9UHD4 219 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDH7Q9ULB5 785 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 NAP1L2Q9ULW6 460 aaPredicted RBP-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 PCDHGB3Q9Y5G1 929 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM14AQ9Y6G1 99 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ANAPC1Q9H1A4 1944 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLXNB3Q9ULL4 1909 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF541Q9H0D2 1346 aa-1.94□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLXNA2O75051 1894 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms