RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 LSMEM2Q8N112 164 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 PARP8Q8N3A8 854 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 RAB42Q8N4Z0 105 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 ARFGAP2Q8N6H7 521 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 ADAD2Q8NCV1 583 aaKnown RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 CD99L2Q8TCZ2 262 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 ERVK-6Q9BXR3 956 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 NLNQ9BYT8 704 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 XKR8Q9H6D3 395 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 ZNF696Q9H7X3 374 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 KCNK13Q9HB14 408 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 LPAR2Q9HBW0 351 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 ZNF346Q9UL40 294 aaKnown RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 CDH9Q9ULB4 789 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 PIGLQ9Y2B2 252 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 IFT52Q9Y366 437 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 MRPL11Q9Y3B7 192 aaKnown RBP4.41□□□□□ -1.7
LSM5-206ENST00000409987 ZNF175Q9Y473 711 aa4.41□□□□□ -1.7
LSM5-206ENST00000409987 PTPRUQ92729 1446 aa4.4□□□□□ -1.7
LSM5-206ENST00000409987 A0A087X002 238 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 PPIAL4CA0A0B4J2A2 164 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 GLTPD2A6NH11 291 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 LRRC30A6NM36 301 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 SRRM4A7MD48 611 aaKnown RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 SPECC1L-ADORA2AF8WAN1 911 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 SLCO1B7G3V0H7 640 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 KIF2AO00139 706 aaPredicted RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 DNAJB6O75190 326 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 KRT14P02533 472 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 PPIAL4GP0DN37 164 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 TSPAN8P19075 237 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 AADACP22760 399 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.71
LSM5-206ENST00000409987 NF2P35240 595 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 MAGEA1P43355 309 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 CDH4P55283 916 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 PAX9P55771 341 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 CARD18P57730 90 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 GUCY2DQ02846 1103 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 SPAG1Q07617 926 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ELAVL3Q14576 367 aaKnown RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 PARP6Q2NL67 630 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 KLHL22Q53GT1 634 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 SPANXN2Q5MJ10 180 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 PWWP2BQ6NUJ5 590 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 KDM7AQ6ZMT4 941 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 DPY19L2P2Q6ZN68 376 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 GPBP1Q86WP2 473 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ELMOD1Q8N336 334 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 GPR137CQ8N3F9 429 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 TEX26Q8N6G2 289 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 DNASE2BQ8WZ79 361 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 PIGCQ92535 297 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 FBXO17Q96EF6 278 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 GMPPAQ96IJ6 420 aaPredicted RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 AKR1E2Q96JD6 320 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ACCSQ96QU6 501 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 CCNL2Q96S94 520 aaPredicted RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 LITAFQ99732 161 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 C11orf70Q9BRQ4 267 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ROPN1BQ9BZX4 212 aaPredicted RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 DHX33Q9H6R0 707 aaKnown RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 NEK6Q9HC98 313 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ZFP14Q9HCL3 533 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ZNHIT6Q9NWK9 470 aaKnown RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 PIPOXQ9P0Z9 390 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 TMEM181Q9P2C4 612 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 POLKQ9UBT6 870 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 DBF4Q9UBU7 674 aaPredicted RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 EPRSP07814 1512 aaKnown RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 ABCA10Q8WWZ4 1543 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 ABCC2Q92887 1545 aa4.4□□□□□ -1.71
LSM5-206ENST00000409987 MYH14Q7Z406 1995 aaKnown RBP4.4□□□□□ -1.71
LSM5-206ENST00000409987 SH3PXD2BA1X283 911 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 PRR23AA6NEV1 266 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 C15orf61A6NNL5 157 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CCSO14618 274 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
LSM5-206ENST00000409987 STK17BO94768 372 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 ALPIP09923 528 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 UQCRBP14927 111 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 FOSL2P15408 326 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CD9P21926 228 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 PCMT1P22061 227 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 GLRA1P23415 457 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CTNNA2P26232 953 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 SEC61GP60059 68 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 BTG1P62324 171 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CDKL1Q00532 357 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CNTN1Q12860 1018 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 TAB1Q15750 504 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 STK11Q15831 433 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CDKN3Q16667 212 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 LRRC37A5PQ49AS3 106 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 FBXO48Q5FWF7 155 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 ATP1A1-AS1Q5TC04 95 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 LRRC66Q68CR7 880 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms