RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CLCA1A8K7I4 914 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 H3BN98 237 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 M0R129 80 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 AP3D1O14617 1153 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 BCAT2O15382 392 aaPredicted RBP23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 CYP7B1O75881 506 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 MED26O95402 600 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 SOX14O95416 240 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 CCNA2P20248 432 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 ALDH4A1P30038 563 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 RGS8P57771 180 aaPredicted RBP23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 COX10Q12887 443 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 SLC13A2Q13183 592 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 GPR68Q15743 365 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 WDR45BQ5MNZ6 344 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 DCST2Q5T1A1 773 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 CCNJQ5T5M9 372 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 GPR151Q8TDV0 419 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 GGHQ92820 318 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 AMBNQ9NP70 447 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 ACOT13Q9NPJ3 140 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 TIMMDC1Q9NPL8 285 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 C11orf16Q9NQ32 467 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 CLN6Q9NWW5 311 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 SATB2Q9UPW6 733 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 SIT1Q9Y3P8 196 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 IGHV5-51A0A0C4DH38 117 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 CPSF4LA6NMK7 179 aaKnown RBP23■■□□□ 1.27
DNMT3A-206ENST00000406659 K7ESF4 209 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 MAN1A2O60476 641 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 STX11O75558 287 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 ZBTB11O95625 1053 aaPredicted RBP23■■□□□ 1.27
DNMT3A-206ENST00000406659 AFF3P51826 1226 aaKnown RBP23■■□□□ 1.27
DNMT3A-206ENST00000406659 EPHA4P54764 986 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 DUSP8Q13202 625 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 FAM53BQ14153 422 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 TRAM2Q15035 370 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 CD300LDQ6UXZ3 194 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 ZNF619Q8N2I2 560 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 MORN4Q8NDC4 146 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 OR6C4Q8NGE1 309 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 CTHRC1Q96CG8 243 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 PEX11GQ96HA9 241 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 ZNF285Q96NJ3 590 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 ZNF350Q9GZX5 532 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 EPHA6Q9UF33 1036 aa23■■□□□ 1.27
DNMT3A-206ENST00000406659 BLACEA4D250 179 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 TRIM64BA6NI03 449 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 NSA2O95478 260 aaKnown RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 MMP11P24347 488 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 GABRA4P48169 554 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 NUDT6P53370 316 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ST3GAL3Q11203 375 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 STX4Q12846 297 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 EIPR1Q53HC9 387 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 TCTE1Q5JU00 501 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 GARNL3Q5VVW2 1013 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 NKAIN2Q5VXU1 208 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 SLX4IPQ5VYV7 408 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ZER1Q7Z7L7 766 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 VWA5B2Q8N398 1253 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ADAMTS18Q8TE60 1221 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 PIK3R3Q92569 461 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 AHCYL2Q96HN2 611 aaKnown RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 SIGLEC11Q96RL6 698 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 RAB33BQ9H082 229 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 DUSP15Q9H1R2 295 aaPredicted RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 LRIT1Q9P2V4 623 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 RNF215Q9Y6U7 377 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 THADAQ6YHU6 1953 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 A0A1W2PPW3 197 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 AGAP5A6NIR3 686 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 COQ9O75208 318 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 AK1P00568 194 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 THBS1P07996 1170 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 IGFBP1P08833 259 aaPredicted RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 PSMB9P28065 219 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 GABRA3P34903 492 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 IFNGR2P38484 337 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 POU6F2P78424 691 aaPredicted RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ALDH6A1Q02252 535 aaKnown RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 MAP4K2Q12851 820 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ZNF155Q12901 538 aaPredicted RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ZNF836Q6ZNA1 936 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 PLEKHM3Q6ZWE6 761 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 ZNF595Q8IYB9 648 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 CD180Q99467 661 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 MCHR1Q99705 422 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 GPN2Q9H9Y4 310 aaPredicted RBP22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 SEMA4GQ9NTN9 838 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 FKBP14Q9NWM8 211 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 KLHL3Q9UH77 587 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 SLC6A14Q9UN76 642 aa22.99■■□□□ 1.27
DNMT3A-206ENST00000406659 SPAG17Q6Q759 2223 aa22.98■■□□□ 1.27
DNMT3A-206ENST00000406659 SH3D21A4FU49 640 aa22.98■■□□□ 1.27
DNMT3A-206ENST00000406659 CLDN4O14493 209 aa22.98■■□□□ 1.27
DNMT3A-206ENST00000406659 CTNSO60931 367 aa22.98■■□□□ 1.27
DNMT3A-206ENST00000406659 CDK1P06493 297 aa22.98■■□□□ 1.27
DNMT3A-206ENST00000406659 TNNI3P19429 210 aa22.98■■□□□ 1.27
DNMT3A-206ENST00000406659 MAT1AQ00266 395 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms