RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MID2Q9UJV3 735 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 FBXL2Q9UKC9 423 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 C19orf53Q9UNZ5 99 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 OR10H1Q9Y4A9 318 aa13.98□□□□□ -0.17
TPM1-207ENST00000403994 SETD2Q9BYW2 2564 aaPredicted RBP13.98□□□□□ -0.17
TPM1-207ENST00000403994 CD8B2A6NJW9 211 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 C17orf51A8MQB3 221 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 NPIPB8E9PQR5 432 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 CBR3O75828 277 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 IL2RAP01589 272 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 PRPH2P23942 346 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 GRK2P25098 689 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 TACR1P25103 407 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 GAS1P54826 345 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 GFRA1P56159 465 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 SNTB1Q13884 538 aaKnown RBP13.97□□□□□ -0.17
TPM1-207ENST00000403994 SF3B4Q15427 424 aaKnown RBP eCLIP13.97□□□□□ -0.171e-9■■□□□ 12.9
TPM1-207ENST00000403994 TESK1Q15569 626 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 ARSKQ6UWY0 536 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 IFNEQ86WN2 208 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 PLCZ1Q86YW0 608 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 OR2L13Q8N349 312 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 OR2W6PQ8NHA6 318 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 APOPT1Q96IL0 206 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 AMDHD1Q96NU7 426 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 GLIPR2Q9H4G4 154 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 DDX18Q9NVP1 670 aaKnown RBP13.97□□□□□ -0.17
TPM1-207ENST00000403994 TAS2R10Q9NYW0 307 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 DKKL1Q9UK85 242 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 ITGB1BP2Q9UKP3 347 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 WBP11Q9Y2W2 641 aaKnown RBP13.97□□□□□ -0.17
TPM1-207ENST00000403994 MED12LQ86YW9 2145 aa13.97□□□□□ -0.17
TPM1-207ENST00000403994 H0Y3Z8 333 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 UPK1AO00322 258 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 PLOD2O00469 737 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 ZWINTO95229 277 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 NEFHP12036 1026 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 CYP4B1P13584 511 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 SRD5A2P31213 254 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 UQCRC1P31930 480 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 EVI2BP34910 448 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 PNLIPRP2P54317 469 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 RCAN2Q14206 197 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 KIAA0040Q15053 153 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 FBXL19-AS1Q494R0 122 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 CES4AQ5XG92 561 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 RNF165Q6ZSG1 346 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 ZZZ3Q8IYH5 903 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 C9orf106Q8NAJ2 232 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 OR2T11Q8NH01 316 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 METTL2AQ96IZ6 378 aaKnown RBP13.96□□□□□ -0.17
TPM1-207ENST00000403994 EGLN2Q96KS0 407 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 FCRL1Q96LA6 429 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 CCT7Q99832 543 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 TUBA1CQ9BQE3 449 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 TRMOQ9BU70 441 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 G6PC3Q9BUM1 346 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 GATA5Q9BWX5 397 aaPredicted RBP13.96□□□□□ -0.17
TPM1-207ENST00000403994 CALHM2Q9HA72 323 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 LRTM1Q9HBL6 345 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 C1orf109Q9NX04 203 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 ZNF629Q9UEG4 869 aaPredicted RBP13.96□□□□□ -0.17
TPM1-207ENST00000403994 FIS1Q9Y3D6 152 aa13.96□□□□□ -0.17
TPM1-207ENST00000403994 C2CD3Q4AC94 2353 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 AZIN1O14977 448 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 PDPK1O15530 556 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 SCO2O43819 266 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 SEC22BO75396 215 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 IFI6P09912 130 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 NUDT17P0C025 328 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 CPN1P15169 458 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 SDC1P18827 310 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 LHX2P50458 406 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
TPM1-207ENST00000403994 SH2D4BQ5SQS7 431 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 KANK2Q63ZY3 851 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 OR5M10Q6IEU7 315 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 ENPP6Q6UWR7 440 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 ADGRE4PQ86SQ3 457 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 TRIM42Q8IWZ5 723 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 ZPLD1Q8TCW7 415 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 RNASE6Q93091 150 aaKnown RBP13.95□□□□□ -0.18
TPM1-207ENST00000403994 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 ZNF764Q96H86 408 aaPredicted RBP13.95□□□□□ -0.18
TPM1-207ENST00000403994 IQCGQ9H095 443 aaKnown RBP13.95□□□□□ -0.18
TPM1-207ENST00000403994 TUBB1Q9H4B7 451 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 FLRT3Q9NZU0 649 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 CRIM1Q9NZV1 1036 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 CLCF1Q9UBD9 225 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 ABCG2Q9UNQ0 655 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 VPS13CQ709C8 3753 aa13.95□□□□□ -0.18
TPM1-207ENST00000403994 MED13LQ71F56 2210 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 TMEM233B4DJY2 109 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 EEF1E1-BLOC1S5C9J1V9 151 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 SLC28A1O00337 649 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 SYT5O00445 386 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 EEF1E1O43324 174 aaKnown RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 RGS14O43566 566 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 TRIM13O60858 407 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 TCEA1P23193 301 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms