RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CASKO14936 926 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 UBXN7O94888 489 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 REEP5Q00765 189 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 SMAD2Q15796 467 aaKnown RBP18.62■□□□□ 0.57
CCDC47-202ENST00000403162 PTCRAQ6ISU1 281 aaPredicted RBP18.62■□□□□ 0.57
CCDC47-202ENST00000403162 ANKK1Q8NFD2 765 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 RGMAQ96B86 450 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 EGLN3Q9H6Z9 239 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 KCNK12Q9HB15 430 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 GIMAP4Q9NUV9 329 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 CUEDC1Q9NWM3 386 aaPredicted RBP18.62■□□□□ 0.57
CCDC47-202ENST00000403162 ALG5Q9Y673 324 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 CASC3O15234 703 aaKnown RBP18.61■□□□□ 0.57
CCDC47-202ENST00000403162 PRKAR1AP10644 381 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 EVX1P49640 407 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 GZMKP49863 264 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 KHKP50053 298 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 CAV3P56539 151 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 TNK1Q13470 666 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 ARHGAP19Q14CB8 494 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 C11orf96Q7Z7L8 435 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 PLCZ1Q86YW0 608 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 ARIH2OSQ8N7S6 290 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 GNPDA2Q8TDQ7 276 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 SLC38A2Q96QD8 506 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 ATF6BQ99941 703 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 GLIPR2Q9H4G4 154 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 NT5DC2Q9H857 520 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 TRPC4Q9UBN4 977 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 COL4A3Q01955 1670 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 NDUFS4O43181 175 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 HPGDSO60760 199 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 PSKH1P11801 424 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 SOX9P48436 509 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 CCR8P51685 355 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 CLDN20P56880 219 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 TRA2BP62995 288 aaKnown RBP18.61■□□□□ 0.57
CCDC47-202ENST00000403162 TYW3Q6IPR3 259 aaKnown RBP18.61■□□□□ 0.57
CCDC47-202ENST00000403162 ZNF366Q8N895 744 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 POGLUT1Q8NBL1 392 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 SUN3Q8TAQ9 357 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 NXPE3Q969Y0 559 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 AMDHD1Q96NU7 426 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 PRRG3Q9BZD7 231 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 PITHD1Q9GZP4 211 aaPredicted RBP18.61■□□□□ 0.57
CCDC47-202ENST00000403162 B3GAT2Q9NPZ5 323 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 CKAP5Q14008 2032 aa18.61■□□□□ 0.57
CCDC47-202ENST00000403162 A0A087WUU8 490 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 PRRT4C9JH25 899 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 LYRM1O43325 122 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 VEGFDO43915 354 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 C1QBP02746 253 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 CHRM4P08173 479 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 CCNYL3P0C7X3 344 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 SLC1A3P43003 542 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 TFF2Q03403 129 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 DPTQ07507 201 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 PAMR1Q6UXH9 720 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 SZRD1Q7Z422 152 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 UBE3DQ7Z6J8 389 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 TMEM145Q8NBT3 493 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 OR8D4Q8NGM9 314 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 KCNJ15Q99712 375 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 TMEM43Q9BTV4 400 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 DDX31Q9H8H2 851 aaKnown RBP18.6■□□□□ 0.57
CCDC47-202ENST00000403162 ZCCHC3Q9NUD5 404 aaKnown RBP18.6■□□□□ 0.57
CCDC47-202ENST00000403162 GPR52Q9Y2T5 361 aa18.6■□□□□ 0.57
CCDC47-202ENST00000403162 FEZF1A0PJY2 475 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 TBC1D3BA6NDS4 549 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 ASGR2P07307 311 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CHRNB1P11230 501 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CFL1P23528 166 aaKnown RBP18.59■□□□□ 0.57
CCDC47-202ENST00000403162 IFNGR2P38484 337 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CD79BP40259 229 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 IL12RB1P42701 662 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 ACSM1Q08AH1 577 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 FUT5Q11128 374 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 TSPAN31Q12999 210 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 RPA4Q13156 261 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 MADCAM1Q13477 382 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 GNA13Q14344 377 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 P2RY14Q15391 338 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 SFTPA1Q8IWL2 248 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 SLC44A3Q8N4M1 653 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 NR4A3Q92570 626 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CHFRQ96EP1 664 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 PINK1Q9BXM7 581 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CLCA2Q9UQC9 943 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 SGK494L7N484 410 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 NDUFB5O43674 189 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 ZNF780AO75290 641 aaPredicted RBP18.59■□□□□ 0.57
CCDC47-202ENST00000403162 HLA-DPB1P04440 258 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 DRD2P14416 443 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 ANXA11P50995 505 aaKnown RBP18.59■□□□□ 0.57
CCDC47-202ENST00000403162 METAP1P53582 386 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 SF3A2Q15428 464 aaKnown RBP18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CCDC58Q4VC31 144 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 MZT2AQ6P582 158 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 RASSF6Q6ZTQ3 369 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 OLIG3Q7RTU3 272 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms