RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NCKAP5O14513 1909 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GXYLT2A0PJZ3 443 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PRRG2O14669 202 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KLF11O14901 512 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ANKRD28O15084 1053 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CLDN1O95832 211 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C6orf47O95873 294 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ALDOCP09972 364 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GDF1P27539 372 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GABRA3P34903 492 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KRT20P35900 424 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RFX3P48380 749 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TRPC1P48995 793 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MLC1Q15049 377 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EMC4Q5J8M3 183 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HIST2H2BCQ6DN03 193 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR4F3Q6IEY1 312 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ANGPTL8Q6UXH0 198 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TRILQ7L0X0 811 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GALNT10Q86SR1 603 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FAM57AQ8TBR7 257 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC9A6Q92581 669 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TMCO6Q96DC7 493 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OTUB1Q96FW1 271 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PRPF18Q99633 342 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 YIPF4Q9BSR8 244 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LMF2Q9BU23 707 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DUSP26Q9BV47 211 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OSBPL11Q9BXB4 747 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC6A15Q9H2J7 730 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LDAHQ9H6V9 325 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CXorf36Q9H7Y0 433 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 Q9N2J8 555 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FLRT3Q9NZU0 649 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NTMQ9P121 344 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CBLCQ9ULV8 474 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PRAMEF25A6NGN4 478 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C17orf51A8MQB3 221 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ADAM10O14672 748 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EMC8O43402 210 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 IFI6P09912 130 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CYP4B1P13584 511 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DDX5P17844 614 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ENDOUP21128 410 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MAP3K8P41279 467 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PNLIPRP2P54317 469 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NME5P56597 212 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PER3P56645 1201 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C21orf58P58505 322 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CYP27C1Q4G0S4 372 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR1J4Q8NGS1 313 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GPR151Q8TDV0 419 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR5P2Q8WZ92 322 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TMEM41AQ96HV5 264 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TEX37Q96LM6 180 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MS4A4EQ96PG1 132 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DPY30Q9C005 99 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 BHLHE41Q9C0J9 482 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 UBQLN3Q9H347 655 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EXO5Q9H790 373 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C3orf14Q9HBI5 128 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLCO1B3Q9NPD5 702 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ZCCHC3Q9NUD5 404 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 B4GALT7Q9UBV7 327 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MAPRE3Q9UPY8 281 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MEMO1Q9Y316 297 aa12.88□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PCNX1Q96RV3 2341 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TRPC5OSA6NMA1 111 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ZNF195O14628 629 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CFLARO15519 480 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SUSD5O60279 629 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TRAPPC6AO75865 159 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 IGKV1D-16P01601 117 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HMGN2P05204 90 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ACP2P11117 423 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MAN2A2P49641 1150 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 WNT3P56703 355 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HBA1P69905 142 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PHC1P78364 1004 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ADORA2A-AS1P86434 159 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SNTA1Q13424 505 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DECR1Q16698 335 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC9B1Q4ZJI4 515 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OGFOD2Q6N063 350 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms