RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MRPS22P82650 360 aaKnown RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 HSPB2Q16082 182 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 PRSS53Q2L4Q9 553 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 SLC25A35Q3KQZ1 300 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 ACSF3Q4G176 576 aaPredicted RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 EMBQ6PCB8 327 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 TMEM107Q6UX40 140 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 NPSR1Q6W5P4 371 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 RNF165Q6ZSG1 346 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 LARP4Q71RC2 724 aaKnown RBP eCLIP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 WDR53Q7Z5U6 358 aaPredicted RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 YRDCQ86U90 279 aaKnown RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 LACC1Q8IV20 430 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 DMRTC2Q8IXT2 367 aaPredicted RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 WDSUB1Q8N9V3 476 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 FAM111AQ96PZ2 611 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 UGT2B28Q9BY64 529 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 GLIPR2Q9H4G4 154 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 SERHLQ9NQF3 203 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 DDX18Q9NVP1 670 aaKnown RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 C19orf53Q9UNZ5 99 aaPredicted RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 WIF1Q9Y5W5 379 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 PTGDR2Q9Y5Y4 395 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 FBN3Q75N90 2809 aa12.22□□□□□ -0.45
VCX3A-202ENST00000398729 FLNAP21333 2647 aaKnown RBP12.22□□□□□ -0.45
VCX3A-202ENST00000398729 UPK1AO00322 258 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 NPHS1O60500 1241 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 LINC00032P0C843 101 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 PSG6Q00889 435 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 CYP27C1Q4G0S4 372 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 SH2D4BQ5SQS7 431 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 KANK2Q63ZY3 851 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 NSUN5P2Q63ZY6 315 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 Q6ZSR9 355 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 SEM1Q6ZVN7 128 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 PLCZ1Q86YW0 608 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 OR2L13Q8N349 312 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 OR4N2Q8NGD1 307 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 OR14L1PQ8NHC6 308 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 AENQ8WTP8 325 aaKnown RBP12.21□□□□□ -0.45
VCX3A-202ENST00000398729 EFHD2Q96C19 240 aaPredicted RBP12.21□□□□□ -0.45
VCX3A-202ENST00000398729 ELP4Q96EB1 424 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 EGLN2Q96KS0 407 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 AMDHD1Q96NU7 426 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 CCT7Q99832 543 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 OR2B2Q9GZK3 357 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 EML4Q9HC35 981 aaKnown RBP12.21□□□□□ -0.45
VCX3A-202ENST00000398729 SLC17A7Q9P2U7 560 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 TMED5Q9Y3A6 229 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
VCX3A-202ENST00000398729 DVL2O14641 736 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 PDPK1O15530 556 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 SPAG7O75391 227 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 SLU7O95391 586 aaKnown RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 IL2RAP01589 272 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 CHRNGP07510 517 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 FGF4P08620 206 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 IFI6P09912 130 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 CD1EP15812 388 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TACR1P25103 407 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 CEACAM8P31997 349 aaPredicted RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 GPC1P35052 558 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TIMP3P35625 211 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 ART1P52961 327 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 RPL38P63173 70 aaKnown RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 RCAN2Q14206 197 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 ZNHIT3Q15649 155 aaPredicted RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 ARL13AQ5H913 290 aaPredicted RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 WDR93Q6P2C0 686 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 IFNEQ86WN2 208 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 DDIASQ8IXT1 998 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 OR2T11Q8NH01 316 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TWIST2Q8WVJ9 160 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 CAVIN3Q969G5 261 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 GFM2Q969S9 779 aaKnown RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 PPCDCQ96CD2 204 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF764Q96H86 408 aaPredicted RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 WDYHV1Q96HA8 205 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 FCRL1Q96LA6 429 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TSSK3Q96PN8 268 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TRIB1Q96RU8 372 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 MECRQ9BV79 373 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TUBB1Q9H4B7 451 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 REEP4Q9H6H4 257 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 Q9N2J8 555 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 MRTO4Q9UKD2 239 aaKnown RBP12.2□□□□□ -0.46
VCX3A-202ENST00000398729 CBLCQ9ULV8 474 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 TRAF6Q9Y4K3 522 aa12.2□□□□□ -0.46
VCX3A-202ENST00000398729 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 TTC36A6NLP5 189 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 LSM1O15116 133 aaKnown RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 PSMG1O95456 288 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 CYP4B1P13584 511 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms