RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ELOVL5Q9NYP7 299 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 MAT2BQ9NZL9 334 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 PRODH2Q9UF12 536 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 MAPRE3Q9UPY8 281 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 DTX4Q9Y2E6 619 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 GPR55Q9Y2T6 319 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-208ENST00000397204 SONP18583 2426 aaKnown RBP7.93□□□□□ -1.14
CAPN3-208ENST00000397204 KIAA1549Q9HCM3 1950 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 RTTNQ86VV8 2226 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 A0A1W2PNV4 684 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 LRRC14BA6NHZ5 514 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 DEFB108AA8MXU0 73 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 OR7A17O14581 309 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 HCRTR2O43614 444 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 ZIC3O60481 467 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 REM1O75628 298 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 BCAS2O75934 225 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 TGM6O95932 706 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 PEPDP12955 493 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF708P17019 499 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 STX2P32856 288 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 FEN1P39748 380 aaKnown RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 EMDP50402 254 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 CCNG1P51959 295 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 CLDN18P56856 261 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 EEFSECP57772 596 aaKnown RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 GNG11P61952 73 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 PSPHP78330 225 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 IFT88Q13099 833 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 MROH9Q5TGP6 573 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 TTC19Q6DKK2 380 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 KLC3Q6P597 504 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 WFDC8Q8IUA0 241 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 GRAMD2AQ8IUY3 354 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 GCNT2Q8N0V5 402 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 CIARTQ8N365 385 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 SPATA3Q8NHX4 192 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 RDH11Q8TC12 318 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 FBF1Q8TES7 1133 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 TM4SF18Q96CE8 201 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 ERP27Q96DN0 273 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 Q96MF0 132 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 SFXN2Q96NB2 322 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 GPR78Q96P69 363 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 NAPGQ99747 312 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 ITPAQ9BY32 194 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 MRPL1Q9BYD6 325 aaKnown RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 BRINP2Q9C0B6 783 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 DPH5Q9H2P9 285 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 NMRK1Q9NWW6 199 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 C6orf203Q9P0P8 240 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-208ENST00000397204 TMCO1Q9UM00 188 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF780BQ9Y6R6 833 aa7.92□□□□□ -1.14
CAPN3-208ENST00000397204 FRG2CA6NGY1 282 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 A6NHS1 94 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 KIAA1324LA8MWY0 1029 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 C16orf97H3BN30 126 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 LINC01387J3KSC0 135 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 EMC8O43402 210 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 TNFRSF21O75509 655 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 ERAL1O75616 437 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 SMNDC1O75940 238 aaKnown RBP eCLIP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 SIX3O95343 332 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CBX7O95931 251 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 RBP1P09455 135 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CT45A8P0DMV1 189 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CT45A9P0DMV2 189 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CRYGSP22914 178 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CNTFP26441 200 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 DPP4P27487 766 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 TYK2P29597 1187 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 ARL1P40616 181 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 PLTPP55058 493 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 TRA2BP62995 288 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 MRPS22P82650 360 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 PPP2R2BQ00005 443 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 IRF9Q00978 393 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 GUCY2DQ02846 1103 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 EFR3AQ14156 821 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 FGFBP1Q14512 234 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 EXOSC7Q15024 291 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 NNATQ16517 81 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 TRMT12Q53H54 448 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CT45A2Q5DJT8 189 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 P4HA3Q7Z4N8 544 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 MILR1Q7Z6M3 343 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 YTHDF3Q7Z739 585 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 SAMD14Q8IZD0 417 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 ADCY4Q8NFM4 1077 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 OR52R1Q8NGF1 315 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 TMBIM1Q969X1 311 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 PIK3IP1Q96FE7 263 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 PGM2Q96G03 612 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 SLC35A4Q96G79 324 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF681Q96N22 645 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 FAM111AQ96PZ2 611 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 MED18Q9BUE0 208 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 FAIM2Q9BWQ8 316 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 ELOVL6Q9H5J4 265 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 BRF2Q9HAW0 419 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms