RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PRSS58Q8IYP2 241 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 HORMAD2Q8N7B1 307 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 OR4C15Q8NGM1 316 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 APOBEC4Q8WW27 367 aaKnown RBP13.9□□□□□ -0.18
CAPN3-207ENST00000397200 GEMIN6Q8WXD5 167 aaKnown RBP13.9□□□□□ -0.18
CAPN3-207ENST00000397200 LZICQ8WZA0 190 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF300Q96RE9 604 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-207ENST00000397200 PITX2Q99697 317 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 PSD2Q9BQI7 771 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ING2Q9H160 280 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 SLC26A1Q9H2B4 701 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 WDR54Q9H977 334 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 LANCL2Q9NS86 450 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 CES1P1Q9UKY3 287 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 ENTPD4Q9Y227 616 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 LYVE1Q9Y5Y7 322 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 CCDC88CQ9P219 2028 aa13.9□□□□□ -0.18
CAPN3-207ENST00000397200 WASHC1A8K0Z3 465 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 M0QX08 132 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF701M0R085 212 aaPredicted RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 BCKDKO14874 412 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 FGF17O60258 216 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 RAD1O60671 282 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 CTNSO60931 367 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 LDB3O75112 727 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 UGT2B11O75310 529 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 DNAJB5O75953 348 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 RECKO95980 971 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 CD63P08962 238 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 JUNBP17275 347 aaPredicted RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 SPINK2P20155 84 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 CASP9P55211 416 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 CD47Q08722 323 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 LSAMPQ13449 338 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 TOP3AQ13472 1001 aaPredicted RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 NCF4Q15080 339 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 CEBPEQ15744 281 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 MAPK11Q15759 364 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 CTU2Q2VPK5 515 aaKnown RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 ZBED5Q49AG3 693 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 C6orf141Q5SZD1 244 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 REEP3Q6NUK4 255 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 MRPL14Q6P1L8 145 aaKnown RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 C6orf120Q7Z4R8 191 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF605Q86T29 641 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 OR4K14Q8NGD5 310 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 SFXN5Q8TD22 340 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 AMDHD1Q96NU7 426 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 GABARAPL3Q9BY60 117 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 GLIPR2Q9H4G4 154 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 SERHL2Q9H4I8 314 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 SLC35C2Q9NQQ7 365 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 PDP1Q9P0J1 537 aaPredicted RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 NXT1Q9UKK6 140 aaKnown RBP13.9□□□□□ -0.19
CAPN3-207ENST00000397200 MKL2Q9ULH7 1088 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 MMACHCQ9Y4U1 282 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF780BQ9Y6R6 833 aa13.9□□□□□ -0.19
CAPN3-207ENST00000397200 SPTBN4Q9H254 2564 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 VSTM2BA6NLU5 285 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-207ENST00000397200 MITFO75030 526 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-207ENST00000397200 GPR75O95800 540 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 OPN1SWP03999 348 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 TFPTP0C1Z6 253 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 TCN2P20062 427 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 CD247P20963 164 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 NTSP30990 170 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 TTKP33981 857 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 PEX19P40855 299 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 LIMS1P48059 325 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 CLK3P49761 638 aaKnown RBP13.89□□□□□ -0.19
CAPN3-207ENST00000397200 BTG2P78543 158 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 STX4Q12846 297 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 HSPB3Q12988 150 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 QSOX2Q6ZRP7 698 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 SHISA6Q6ZSJ9 500 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 OR4N5Q8IXE1 308 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 SAMD14Q8IZD0 417 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-207ENST00000397200 SETD9Q8NE22 299 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 SPPL2AQ8TCT8 520 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 CT55Q8WUE5 264 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 BBS4Q96RK4 519 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
CAPN3-207ENST00000397200 NDRG4Q9ULP0 352 aaKnown RBP13.89□□□□□ -0.19
CAPN3-207ENST00000397200 WASF3Q9UPY6 502 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 SNX8Q9Y5X2 465 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
CAPN3-207ENST00000397200 DCHS1Q96JQ0 3298 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 OR2W5A6NFC9 320 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 H3BSA7 217 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 HMGN4O00479 90 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 ABCB7O75027 752 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 CNOT3O75175 753 aaKnown RBP13.88□□□□□ -0.19
CAPN3-207ENST00000397200 HEXBP07686 556 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms