RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 TACC2O95359 2948 aa10.15□□□□□ -0.78
NDUFA9-202ENST00000396655 DCHS2Q6V1P9 2916 aa10.15□□□□□ -0.78
NDUFA9-202ENST00000396655 AHRRA9YTQ3 701 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 TMEM233B4DJY2 109 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 PDPK1O15530 556 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 REM1O75628 298 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 HSPA4LO95757 839 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 CELA3AP09093 270 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 PRPS1L1P21108 318 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 GDF1P27539 372 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 HTR1EP28566 365 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 HPCAL1P37235 193 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 MAP3K8P41279 467 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 MC3RP41968 323 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 MASP1P48740 699 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 PSMD4P55036 377 aaKnown RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 MANFP55145 182 aaKnown RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 C21orf58P58505 322 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 ABCE1P61221 599 aaKnown RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 EMX2Q04743 252 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 GALNTL6Q49A17 601 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 VPS26BQ4G0F5 336 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 BEND6Q5SZJ8 279 aaPredicted RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 SLC44A2Q8IWA5 706 aaPredicted RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 PM20D2Q8IYS1 436 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 PRR22Q8IZ63 422 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 LIX1Q8N485 282 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 OR1J4Q8NGS1 313 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 LILRB4Q8NHJ6 448 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 RND1Q92730 232 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 TMBIM1Q969X1 311 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 GNRHR2Q96P88 292 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 TSSK3Q96PN8 268 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 PRPF18Q99633 342 aaKnown RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 LMF2Q9BU23 707 aaKnown RBP10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 Q9N2J8 555 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 ATAD3AQ9NVI7 634 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 ASIC5Q9NY37 505 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 BAIAP2L1Q9UHR4 511 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 ABCG2Q9UNQ0 655 aa10.14□□□□□ -0.79
NDUFA9-202ENST00000396655 F8P00451 2351 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PRAMEF25A6NGN4 478 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PRSS44E7EML9 344 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PEX11AO75192 247 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 ACTL6AO96019 429 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 ENDOUP21128 410 aaKnown RBP10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PTPN6P29350 595 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 IL12BP29460 328 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 CHRNB4P30926 498 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 LCN1P31025 176 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PTGDSP41222 190 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 RPL14P50914 215 aaKnown RBP10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 CORO7P57737 925 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 MPP2Q14168 576 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 CHI3L2Q15782 390 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 NNATQ16517 81 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 DECR1Q16698 335 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 BICRALQ6AI39 1079 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 VASNQ6EMK4 673 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 TMEM107Q6UX40 140 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 NPSR1Q6W5P4 371 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 B3GNT6Q6ZMB0 384 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 LARP4Q71RC2 724 aaKnown RBP eCLIP10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PLCZ1Q86YW0 608 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PSMA8Q8TAA3 256 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 RAB3IL1Q8TBN0 382 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 CA5BP1Q8WTZ4 195 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 COQ8BQ96D53 544 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 C3orf30Q96M34 536 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 JSRP1Q96MG2 331 aaPredicted RBP10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 NODALQ96S42 347 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 ADOQ96SZ5 270 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 TTYH2Q9BSA4 534 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 OSBPL11Q9BXB4 747 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 CENPHQ9H3R5 247 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 EXO5Q9H790 373 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 ANKRA2Q9H9E1 313 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 KCNK9Q9NPC2 374 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 SDHAF3Q9NRP4 125 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 PNPLA3Q9NST1 481 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 GIN1Q9NXP7 522 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 KLRF1Q9NZS2 232 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 SH3BP4Q9P0V3 963 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 EIF3LQ9Y262 564 aaKnown RBP10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 OR10H1Q9Y4A9 318 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 LIPGQ9Y5X9 500 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 NUP214P35658 2090 aaPredicted RBP10.13□□□□□ -0.79
NDUFA9-202ENST00000396655 SCAMP2O15127 329 aaKnown RBP10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 ZNHIT1O43257 154 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 EMC8O43402 210 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 AKAP10O43572 662 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 NKX2-2O95096 273 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 IL33O95760 270 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 CPN1P15169 458 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 COL8A1P27658 744 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 GCKP35557 465 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 SLC1A6P48664 564 aa10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 CLK3P49761 638 aaKnown RBP10.12□□□□□ -0.79
NDUFA9-202ENST00000396655 PRR5P85299 388 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms