RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 HOXD1Q9GZZ0 328 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 B4GALT7Q9UBV7 327 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 MALT1Q9UDY8 824 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 GNG8Q9UK08 70 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 SLC35F4A4IF30 521 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 INMTO95050 263 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 STAT5AP42229 794 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 TAB1Q15750 504 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 ZNF440Q8IYI8 595 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 NLGN4YQ8NFZ3 816 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 OR8J1Q8NGP2 316 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 TM4SF18Q96CE8 201 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 LRR1Q96L50 414 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 CCDC115Q96NT0 180 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 TNFRSF12AQ9NP84 129 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 RPH3AQ9Y2J0 694 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 MAGED1Q9Y5V3 778 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 MTCH2Q9Y6C9 303 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 SCN10AQ9Y5Y9 1956 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 OTOL1A6NHN0 477 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 PROM1O43490 865 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 CKMT1AP12532 417 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 NR2C1P13056 603 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 MAP3K8P41279 467 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 KCNAB1Q14722 419 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 IDNKQ5T6J7 187 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 CARD17Q5XLA6 110 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 ZSCAN1Q8NBB4 408 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 FAM118AQ9NWS6 357 aa12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-202ENST00000389416 METTL12A8MUP2 240 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 H0YAE9 185 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TSPAN12O95859 305 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 BMP1P13497 986 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SDC2P34741 201 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SFTPDP35247 375 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 RAB38P57729 211 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 EEF1A2Q05639 463 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TMEM236Q5W0B7 351 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 LHFPL3Q86UP9 236 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ZNF619Q8N2I2 560 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 OR5T3Q8NGG3 340 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TREX2Q9BQ50 279 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ZNF559Q9BR84 538 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TMEM121BQ9BXQ6 578 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 QRSL1Q9H0R6 528 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SLC6A14Q9UN76 642 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SMIM30A4D0T7 59 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ZNF670-ZNF695F2Z2N8 137 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TSC22D2O75157 780 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 COL9A1P20849 921 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SLC6A12P48065 614 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TXNL4AP83876 142 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CHRNEQ04844 493 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ZNF595Q8IYB9 648 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 IQCF1Q8N6M8 205 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CEP76Q8TAP6 659 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TEX101Q9BY14 249 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CXorf36Q9H7Y0 433 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TRIM36Q9NQ86 728 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ICKQ9UPZ9 632 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CACNA1EQ15878 2313 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 GXYLT2A0PJZ3 443 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 NPIPA2E9PIF3 369 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 NPIPA3F8WFD2 350 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SIGLEC6O43699 453 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 IDH3BO43837 385 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 PLOD3O60568 738 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SERPINA3P01011 423 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 BMP2P12643 396 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CELP19835 753 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 MVKQ03426 396 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TMEM64Q6YI46 380 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SH2D5Q6ZV89 423 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 VRK2Q86Y07 508 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CHTF18Q8WVB6 975 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 MAELQ96JY0 434 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SECISBP2Q96T21 854 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ELF4Q99607 663 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 KLHL31Q9H511 634 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 TMEM138Q9NPI0 162 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ARMC1Q9NVT9 282 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 USP36Q9P275 1121 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 LAMP5Q9UJQ1 280 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SLC7A7Q9UM01 511 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 GPR52Q9Y2T5 361 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 NSG1A0A0A6YYJ2 146 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 A0A1B0GTL3 188 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 LRIT2A6NDA9 550 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 SPARCP09486 303 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 MYF5P13349 255 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 OGFRL1Q5TC84 451 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 FAM180AQ6UWF9 173 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CROCCP3Q8IVE0 287 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 OR4K13Q8NH42 304 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 CRELD1Q96HD1 420 aa12.32□□□□□ -0.44
PTPRN2-202ENST00000389416 ZFP3Q96NJ6 502 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms