RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 DSCAMO60469 2012 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 PRR14LQ5THK1 2151 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 ACOX3O15254 700 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 IL18BPO95998 194 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 JUNP05412 331 aaKnown RBP17.42■□□□□ 0.38
CBWD3-204ENST00000377349 TCEA1P23193 301 aaKnown RBP17.42■□□□□ 0.38
CBWD3-204ENST00000377349 IL12BP29460 328 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 EMDP50402 254 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 NCBP2P52298 156 aaKnown RBP eCLIP17.42■□□□□ 0.38
CBWD3-204ENST00000377349 DGKQP52824 942 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 CORO7P57737 925 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 ZNF763Q0D2J5 394 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 FOXF2Q12947 444 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 CAMKMTQ7Z624 323 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 ADGRE4PQ86SQ3 457 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 YRDCQ86U90 279 aaKnown RBP17.42■□□□□ 0.38
CBWD3-204ENST00000377349 KRTAP1-3Q8IUG1 177 aa17.42■□□□□ 0.38
CBWD3-204ENST00000377349 PRAMEF25A6NGN4 478 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 SNPHO15079 494 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 UGT2B11O75310 529 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 RAF1P04049 648 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 FOSL1P15407 271 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 NAGAP17050 411 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 CRHR1P34998 444 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 PPICP45877 212 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 DCAF7P61962 342 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 IFFO1Q0D2I5 559 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 NUP54Q7Z3B4 507 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 KIF18BQ86Y91 864 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 SAMD14Q8IZD0 417 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-204ENST00000377349 CNPY4Q8N129 248 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 WFDC11Q8NEX6 87 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 ZPLD1Q8TCW7 415 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 CTHRC1Q96CG8 243 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 ADOQ96SZ5 270 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 G6PC3Q9BUM1 346 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 TNFRSF12AQ9NP84 129 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 SERHLQ9NQF3 203 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 RRAGDQ9NQL2 400 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-204ENST00000377349 OR10H1Q9Y4A9 318 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 PTGDR2Q9Y5Y4 395 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 CSPG4Q6UVK1 2322 aa17.41■□□□□ 0.38
CBWD3-204ENST00000377349 FRG2CA6NGY1 282 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 EEF1E1-BLOC1S5C9J1V9 151 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 EEF1E1O43324 174 aaKnown RBP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 ICOSLGO75144 302 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 CDH16O75309 829 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 ERN1O75460 977 aaKnown RBP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 BCAS2O75934 225 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 CPN1P15169 458 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 NTSP30990 170 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 MPIP34949 423 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 OPRM1P35372 400 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 GCKP35557 465 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 SF3B4Q15427 424 aaKnown RBP eCLIP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 DEFB113Q30KQ7 82 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 TMEM107Q6UX40 140 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 PLXDC2Q6UX71 529 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 C10orf107Q8IVU9 208 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 WDSUB1Q8N9V3 476 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 OR14L1PQ8NHC6 308 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 ZNF675Q8TD23 568 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 GFM2Q969S9 779 aaKnown RBP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 EFHD2Q96C19 240 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 TMCO6Q96DC7 493 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 COL21A1Q96P44 957 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 TUBA1CQ9BQE3 449 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 PPCSQ9HAB8 311 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 FOLH1BQ9HBA9 442 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 OXSMQ9NWU1 459 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 EDARQ9UNE0 448 aa17.4■□□□□ 0.38
CBWD3-204ENST00000377349 RAI1Q7Z5J4 1906 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-204ENST00000377349 CLCA1A8K7I4 914 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 SEC22BO75396 215 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 ACTL6AO96019 429 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 HRGP04196 525 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 TMIGD3P0DMS9 266 aaPredicted RBP17.39■□□□□ 0.38
CBWD3-204ENST00000377349 DDCP20711 480 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 DRD5P21918 477 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 MC3RP41968 323 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 RFX3P48380 749 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 LIPMQ5VYY2 423 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 SLC30A6Q6NXT4 461 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 LARP4Q71RC2 724 aaKnown RBP eCLIP17.39■□□□□ 0.38
CBWD3-204ENST00000377349 TDRPQ86YL5 185 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 SLC44A2Q8IWA5 706 aaPredicted RBP17.39■□□□□ 0.38
CBWD3-204ENST00000377349 EIF1ADQ8N9N8 165 aaKnown RBP17.39■□□□□ 0.38
CBWD3-204ENST00000377349 OR7G2Q8NG99 324 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 OR2B2Q9GZK3 357 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 MID2Q9UJV3 735 aa17.39■□□□□ 0.38
CBWD3-204ENST00000377349 B4DXG7 233 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 UROSP10746 265 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 HOXC12P31275 282 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 DNAJB13P59910 316 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 NAA20P61599 178 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 SRYQ05066 204 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 SNTA1Q13424 505 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 OR5M10Q6IEU7 315 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 NOXRED1Q6NXP6 359 aa17.38■□□□□ 0.37
CBWD3-204ENST00000377349 GALNT18Q6P9A2 607 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms