RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SNAPC3Q92966 411 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 TOE1Q96GM8 510 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 COL21A1Q96P44 957 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 SERINC2Q96SA4 455 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 TREX2Q9BQ50 279 aaPredicted RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 TWSG1Q9GZX9 223 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 MS4A12Q9NXJ0 267 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 LIPT1Q9Y234 373 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CA5BQ9Y2D0 317 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 MDC1Q14676 2089 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 CCDC88CQ9P219 2028 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 TRAV20A0A0B4J274 112 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 OR6C65A6NJZ3 312 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 C2CD4DB7Z1M9 353 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 FAAHO00519 579 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 PLD2O14939 933 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 B4GALT2O60909 372 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 EML2O95834 649 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CBLP22681 906 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 BMP8BP34820 402 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 DEFA1P59665 94 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 DEFA3P59666 94 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 BNC1Q01954 994 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CCINQ13939 588 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 ENTHD1Q8IYW4 607 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CCDC116Q8IYX3 515 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 SUN3Q8TAQ9 357 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 APOBEC4Q8WW27 367 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 DGCR6LQ9BY27 220 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 IMPAD1Q9NX62 359 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 USP36Q9P275 1121 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 ERVK-18Q9QC07 812 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 RNF6Q9Y252 685 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 KIR2DS5A0A0G2JLQ3 304 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 A0A0G2JNG1 304 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 DUXAA6NLW8 204 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 J3KTA2 159 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 KIR2DS3K7RE56 304 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 PCDH17O14917 1159 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 PGRMC2O15173 223 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CASC3O15234 703 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 AGR2O95994 175 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 IGLV3-19P01714 112 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 H1F0P07305 194 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 PUM1Q14671 1186 aaKnown RBP eCLIP7.72□□□□□ -1.176e-7■■■□□ 14.9
UBR4-202ENST00000375224 GANABQ14697 944 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 KIR2DS5Q14953 304 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 MANEAQ5SRI9 462 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 KIAA0895LQ68EN5 471 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 FIGLAQ6QHK4 219 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 ABHD13Q7L211 337 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 ABI3BPQ7Z7G0 1075 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 RHOXF1Q8NHV9 184 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 GPBAR1Q8TDU6 330 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 FAR1Q8WVX9 515 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 HMGB4Q8WW32 186 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 TM4SF19Q96DZ7 209 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CNRIP1Q96F85 164 aaPredicted RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 OPALINQ96PE5 141 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 SEC22CQ9BRL7 303 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 RASSF1Q9NS23 344 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 PAK1IP1Q9NWT1 392 aaPredicted RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 ACTR10Q9NZ32 417 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 ZNF224Q9NZL3 707 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 CYB5R1Q9UHQ9 305 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 ENPP5Q9UJA9 477 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 DIMT1Q9UNQ2 313 aaKnown RBP7.72□□□□□ -1.17
UBR4-202ENST00000375224 KLK4Q9Y5K2 254 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 SPACA6W5XKT8 324 aa7.72□□□□□ -1.17
UBR4-202ENST00000375224 GLOD5A6NK44 160 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 A8MUA0 341 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 C2orf74A8MZ97 194 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 B3GALT2O43825 422 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 PCDHGA12O60330 932 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 CPNE3O75131 537 aaKnown RBP7.71□□□□□ -1.17
UBR4-202ENST00000375224 STATHP02808 62 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 UGT2B7P16662 529 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 EPHA2P29317 976 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 CAPZA2P47755 286 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 SEPHS1P49903 392 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 DGKEP52429 567 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 PRKAG1P54619 331 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 TSC22D1Q15714 1073 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 SYPL1Q16563 259 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 C21orf62-AS1Q17RA5 79 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 CYP27C1Q4G0S4 372 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 TOR2AQ5JU69 321 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 TPRG1LQ5T0D9 272 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 SYT6Q5T7P8 510 aaPredicted RBP7.71□□□□□ -1.17
UBR4-202ENST00000375224 FBXO42Q6P3S6 717 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 VN1R4Q7Z5H5 301 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 BTLAQ7Z6A9 289 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 SLCO6A1Q86UG4 719 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 PM20D2Q8IYS1 436 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 GJD3Q8N144 294 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 AQP11Q8NBQ7 271 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 GPR32P1Q8NGA4 272 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 UTP15Q8TED0 518 aaKnown RBP7.71□□□□□ -1.17
UBR4-202ENST00000375224 RSC1A1Q92681 617 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms