RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 TNFSF14O43557 240 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 CTSVO60911 334 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 SLITRK5O94991 958 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 EPPINO95925 133 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
HMGCL-202ENST00000374487 IFNA8P32881 189 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 TGFBR1P36897 503 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 RGS6P49758 472 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 TNFRSF17Q02223 184 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 NDUFA9Q16795 377 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 RGS21Q2M5E4 152 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 SLC36A4Q6YBV0 504 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 ABHD13Q7L211 337 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 SLC46A3Q7Z3Q1 461 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 WDR53Q7Z5U6 358 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-202ENST00000374487 IGFN1Q86VF2 1251 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 IQCHQ86VS3 1027 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 WDR36Q8NI36 951 aaKnown RBP11.32□□□□□ -0.6
HMGCL-202ENST00000374487 ORAI3Q9BRQ5 295 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 FUZQ9BT04 418 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 SLC38A1Q9H2H9 487 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 KLHL28Q9NXS3 571 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 TAS2R16Q9NYV7 291 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 B3GNT3Q9Y2A9 372 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 CEP192Q8TEP8 1941 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 TNFP01375 233 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 MMP11P24347 488 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 IDUAP35475 653 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 RAB15P59190 212 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 SIM1P81133 766 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ATP1A4Q13733 1029 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 RRM2BQ7LG56 351 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF367Q7RTV3 350 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ZER1Q7Z7L7 766 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 OR4N5Q8IXE1 308 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 TCEANCQ8N8B7 351 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 FLVCR1-AS1Q8TAF5 88 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 KLHL6Q8WZ60 621 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ZG16BQ96DA0 208 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 TM4SF19Q96DZ7 209 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ALOXE3Q9BYJ1 711 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 CACYBPQ9HB71 228 aaKnown RBP11.31□□□□□ -0.6
HMGCL-202ENST00000374487 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 GIN1Q9NXP7 522 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 TVP23BQ9NYZ1 205 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 DNAJC27Q9NZQ0 273 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ERGIC3Q9Y282 383 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 FAM186AA6NE01 2351 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 NINQ8N4C6 2090 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-202ENST00000374487 SYT5O00445 386 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 P2RX6O15547 441 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 CFIP05156 583 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 CCNYL3P0C7X3 344 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 IFNGR2P38484 337 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 AVPR1BP47901 424 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 MAN2A2P49641 1150 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 IRF3Q14653 427 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 FAM214AQ32MH5 1076 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 INAVAQ3KP66 663 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 TRIM61Q5EBN2 209 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 C12orf73Q69YU5 71 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 FCRL6Q6DN72 434 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 PRR23CQ6ZRP0 262 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 OR13H1Q8NG92 308 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 OR7G2Q8NG99 324 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 MCFD2Q8NI22 146 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 PATE1Q8WXA2 126 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 COX4I2Q96KJ9 171 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 C10orf90Q96M02 699 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 MS4A4EQ96PG1 132 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 ZFYVE21Q9BQ24 234 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 KCMF1Q9P0J7 381 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 CPNE7Q9UBL6 633 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 NDOR1Q9UHB4 597 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 OSGIN1Q9UJX0 560 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 DAPP1Q9UN19 280 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 IFT52Q9Y366 437 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
HMGCL-202ENST00000374487 HS3ST3A1Q9Y663 406 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 PMF1-BGLAPU3KQ54 211 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 PIEZO1Q92508 2521 aa11.31□□□□□ -0.6
HMGCL-202ENST00000374487 TNRC6BQ9UPQ9 1833 aaKnown RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 LOC102723532A0A0G2JNH3 316 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 LNP1A1A4G5 178 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 C2orf74A8MZ97 194 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 PRAMEF26H0Y7S4 382 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 FRS3O43559 492 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 TLX2O43763 284 aaPredicted RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 AGR2O95994 175 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OCM2P0CE71 109 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OCMP0CE72 109 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms