RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 IRF8Q02556 426 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ACSM2AQ08AH3 577 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 SELPLGQ14242 412 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 HIST2H2ACQ16777 129 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 PTCHD3Q3KNS1 767 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 TIMM50Q3ZCQ8 353 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 PRR30Q53SZ7 412 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 FGD3Q5JSP0 725 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 MANEAQ5SRI9 462 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ATXN7L2Q5T6C5 722 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 CPTPQ5TA50 214 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 UBE2UQ5VVX9 321 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ACSM2BQ68CK6 577 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 LRRC66Q68CR7 880 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 TMEM215Q68D42 235 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 TMEM200BQ69YZ2 307 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 HIST2H2AA3Q6FI13 130 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 C22orf39Q6P5X5 142 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 SUSD1Q6UWL2 747 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ENPP6Q6UWR7 440 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 LINGO4Q6UY18 593 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 DCDC5Q6ZRR9 648 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 IKBIPQ70UQ0 350 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 HEATR4Q86WZ0 1026 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ZNF761Q86XN6 746 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 TTC29Q8NA56 475 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 C11orf65Q8NCR3 313 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 CLRN3Q8NCR9 226 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 WDR36Q8NI36 951 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 WDR20Q8TBZ3 569 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 SORCS1Q8WY21 1168 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ESAMQ96AP7 390 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 C11orf24Q96F05 449 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ZNF764Q96H86 408 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 SH3YL1Q96HL8 342 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 AJUBAQ96IF1 538 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 LMLNQ96KR4 655 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 SPATA25Q9BR10 227 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 DOHHQ9BU89 302 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 EFCAB11Q9BUY7 163 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 DUSP26Q9BV47 211 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 MROQ9BYG7 248 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 PITHD1Q9GZP4 211 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 MMP27Q9H306 513 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 POFUT1Q9H488 388 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 FAM83DQ9H4H8 585 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 TMEM38AQ9H6F2 299 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 SYNDIG1Q9H7V2 258 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 CCDC177Q9NQR7 707 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 AHSPQ9NZD4 102 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 WARS2Q9UGM6 360 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 ATP6V1HQ9UI12 483 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 PAIP2BQ9ULR5 123 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 POFUT2Q9Y2G5 429 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 GMPPBQ9Y5P6 360 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 KCNE2Q9Y6J6 123 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 PRSS21Q9Y6M0 314 aa6.09□□□□□ -1.43
ECHDC1-202ENST00000368289 PCM1Q15154 2024 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 AKAP6Q13023 2319 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 PNMA8CA0A1B0GUJ8 204 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 NPIPB15A6NHN6 443 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 C9JVG2 144 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 SLC9A3R1O14745 358 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 SCAMP2O15127 329 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 YKT6O15498 198 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 GPR42O15529 346 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 SCN2BO60939 215 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ZNF821O75541 412 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 SNX4O95219 450 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ZBTB11O95625 1053 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 KRT75O95678 551 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 CLIC3O95833 236 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 IRF1P10914 325 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 PCNAP12004 261 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 COX7A2P14406 83 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ZNF182P17025 639 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 EPORP19235 508 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 HALP42357 657 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ARRB1P49407 418 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 BCAP31P51572 246 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 HMGA2P52926 109 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 PFN3P60673 137 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 COPZ1P61923 177 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 EMX1Q04741 257 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 NPRL3Q12980 569 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 CHIT1Q13231 466 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 NR1D2Q14995 579 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 MAD2L1BPQ15013 274 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 TBCEQ15813 527 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 NPTX1Q15818 432 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 CTF1Q16619 201 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 MEP1AQ16819 746 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ZNF630Q2M218 657 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ZNF284Q2VY69 593 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ZIK1Q3SY52 487 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 ATP13A5Q4VNC0 1218 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 PYCR3Q53H96 274 aa6.08□□□□□ -1.44
ECHDC1-202ENST00000368289 KIAA0895LQ68EN5 471 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms