RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 MRPS22P82650 360 aaKnown RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 HSPB3Q12988 150 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 EFR3AQ14156 821 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 LSM12Q3MHD2 195 aaKnown RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 VPS26BQ4G0F5 336 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 CPTPQ5TA50 214 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 FNDC7Q5VTL7 733 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 BICRALQ6AI39 1079 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 TIGD3Q6B0B8 471 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 ZCCHC12Q6PEW1 402 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 XKRXQ6PP77 449 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 NPSR1Q6W5P4 371 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 LARP4Q71RC2 724 aaKnown RBP eCLIP9.02□□□□□ -0.97
CD48-202ENST00000368046 TRILQ7L0X0 811 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 NUP43Q8NFH3 380 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 OR7A2PQ8NGA2 310 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 OR4N2Q8NGD1 307 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 OR1J4Q8NGS1 313 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 OR5P2Q8WZ92 322 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 CCDC120Q96HB5 630 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 TMEM41AQ96HV5 264 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 ATP6V1G3Q96LB4 118 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 ZNF597Q96LX8 424 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 JSRP1Q96MG2 331 aaPredicted RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 GNRHR2Q96P88 292 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 ADOQ96SZ5 270 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 VKORC1Q9BQB6 163 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 LMF2Q9BU23 707 aaKnown RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 NUF2Q9BZD4 464 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 VIPAS39Q9H9C1 493 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 Q9N2J8 555 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 NOP53Q9NZM5 478 aaKnown RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 B4GALT7Q9UBV7 327 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 PLEKHB1Q9UF11 243 aaPredicted RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 MRTO4Q9UKD2 239 aaKnown RBP9.02□□□□□ -0.97
CD48-202ENST00000368046 MEMO1Q9Y316 297 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 OR10H1Q9Y4A9 318 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 HRH3Q9Y5N1 445 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 POLEQ07864 2286 aa9.02□□□□□ -0.97
CD48-202ENST00000368046 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 LRRK2Q5S007 2527 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 LRRC3CA6NJW4 275 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 NPIPA2E9PIF3 369 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 NPIPA3F8WFD2 350 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 AQP7O14520 342 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 ADAM10O14672 748 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 GNB5O14775 395 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 BCKDKO14874 412 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 KLF11O14901 512 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 HDAC3O15379 428 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 NKX2-2O95096 273 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 HPNP05981 417 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 CELA3AP09093 270 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 H2AFXP16104 143 aaPredicted RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 LBPP18428 481 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 ELAVL4P26378 380 aaKnown RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 IL12BP29460 328 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 GABRA3P34903 492 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 PTGDSP41222 190 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 MAP3K8P41279 467 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 CDK9P50750 372 aaKnown RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 SMSP52788 366 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 PRKAG1P54619 331 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 PSMD4P55036 377 aaKnown RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 DIO3P55073 304 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 C21orf58P58505 322 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 DECR1Q16698 335 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 EMC4Q5J8M3 183 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 RPTNQ6XPR3 784 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 MAMDC2Q7Z304 686 aaPredicted RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 CAMKMTQ7Z624 323 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 MRGPRGQ86SM5 289 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 KRTCAP2Q8N6L1 136 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 CDRT4Q8N9R6 151 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 PSMA8Q8TAA3 256 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 NUDT8Q8WV74 236 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 ZNF75CPQ92670 426 aaPredicted RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 SARAFQ96BY9 339 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 DUSP26Q9BV47 211 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 BHLHE41Q9C0J9 482 aaPredicted RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 ZNF703Q9H7S9 590 aaPredicted RBP9.01□□□□□ -0.97
CD48-202ENST00000368046 MEAF6Q9HAF1 191 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 KLRF1Q9NZS2 232 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 ACAD8Q9UKU7 415 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 CBLCQ9ULV8 474 aa9.01□□□□□ -0.97
CD48-202ENST00000368046 SETXQ7Z333 2677 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 GIMAP1-GIMAP5A0A087WTJ2 511 aa9□□□□□ -0.97
CD48-202ENST00000368046 A1L4Q6 167 aa9□□□□□ -0.97
CD48-202ENST00000368046 PRAMEF25A6NGN4 478 aa9□□□□□ -0.97
CD48-202ENST00000368046 TRPC5OSA6NMA1 111 aa9□□□□□ -0.97
CD48-202ENST00000368046 J3QL48 77 aa9□□□□□ -0.97
CD48-202ENST00000368046 TRAPPC6AO75865 159 aa9□□□□□ -0.97
CD48-202ENST00000368046 SOX30O94993 753 aa9□□□□□ -0.97
CD48-202ENST00000368046 KCNH1O95259 989 aa9□□□□□ -0.97
CD48-202ENST00000368046 IL33O95760 270 aa9□□□□□ -0.97
CD48-202ENST00000368046 CLDN1O95832 211 aa9□□□□□ -0.97
CD48-202ENST00000368046 HOXD4P09016 255 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms