RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 HTR5AP47898 357 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 FNTAP49354 379 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC25A1P53007 311 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 PPIAP62937 165 aaKnown RBP3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZP4Q12836 540 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 SPP2Q13103 211 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 CEBPEQ15744 281 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 RNF212Q495C1 297 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 PARP10Q53GL7 1025 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 DMKNQ6E0U4 476 aaPredicted RBP3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 LEG1Q6P5S2 330 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC39A4Q6P5W5 647 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 CNSTQ6PJW8 725 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 PAQR9Q6ZVX9 377 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 NET1Q7Z628 596 aaPredicted RBP3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 NCLNQ969V3 563 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 CARD6Q9BX69 1037 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 IKZF5Q9H5V7 419 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 TNFRSF19Q9NS68 423 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 DUS2Q9NX74 493 aaKnown RBP3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZNF490Q9ULM2 529 aaPredicted RBP3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 TP53TG3Q9ULZ0 132 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 DHRS7Q9Y394 339 aa3.17□□□□□ -1.9
RNU6-560P-201ENST00000364007 IGHV3-35A0A0C4DH35 117 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 LGALS8O00214 317 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 ALOX15BO15296 676 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 GPAA1O43292 621 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 CCNA2P20248 432 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 IGFBP5P24593 272 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 GDF1P27539 372 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 ALDH3B2P48448 385 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 STK19P49842 368 aaPredicted RBP3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 METAP1P53582 386 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 ERVPABLB-1P60509 514 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 RPS6P62753 249 aaKnown RBP3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 IL18R1Q13478 541 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 TGIF1Q15583 401 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 GSG1Q2KHT4 349 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 UTF1Q5T230 341 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 Q7L0L9 218 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 C11orf53Q8IXP5 236 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 HDDC3Q8N4P3 179 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 FAM71CQ8NEG0 241 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 ADIPOR1Q96A54 375 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC25A36Q96CQ1 311 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 SERAC1Q96JX3 654 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 NMNAT2Q9BZQ4 307 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 RAB17Q9H0T7 212 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLITRK2Q9H156 845 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 ROPN1Q9HAT0 212 aaPredicted RBP3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 YAE1D1Q9NRH1 226 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 KLRF1Q9NZS2 232 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 SENP1Q9P0U3 644 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC2A6Q9UGQ3 507 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 BARX2Q9UMQ3 279 aaPredicted RBP3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 CLCA3PQ9Y6N3 262 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 CUX2O14529 1486 aa3.16□□□□□ -1.9
RNU6-560P-201ENST00000364007 TRBV7-9A0A0J9YWB2 115 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 RNF222A6NCQ9 220 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 E9PMD0 336 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 SGK494L7N484 410 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 PRPSAP2O60256 369 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 NOL4O94818 638 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 DUSP14O95147 198 aaKnown RBP3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 NDUFA7O95182 113 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 CT45A10P0DMU9 189 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 MAPK3P27361 379 aaPredicted RBP3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 CAMLGP49069 296 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 ASAH1Q13510 395 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 UBE2V2Q15819 145 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 PAN3Q58A45 887 aaKnown RBP3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 TOR1AIP1Q5JTV8 583 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 RAET1GQ6H3X3 334 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 IRGCQ6NXR0 463 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 BTNL3Q6UXE8 466 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 ERICH1Q86X53 443 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 NFAM1Q8NET5 270 aaPredicted RBP3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 VSIG2Q96IQ7 327 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 SIGLEC12Q96PQ1 595 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 OR5M11Q96RB7 305 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 DEFB126Q9BYW3 111 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 KRT23Q9C075 422 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 C1orf21Q9H246 121 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 KAT8Q9H7Z6 458 aaKnown RBP3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 NGBQ9NPG2 151 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 TRPV5Q9NQA5 729 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 MIEF1Q9NQG6 463 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 DUSP12Q9UNI6 340 aa3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 EXOSC1Q9Y3B2 195 aaKnown RBP3.15□□□□□ -1.91
RNU6-560P-201ENST00000364007 FBLL1A6NHQ2 334 aaKnown RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 H3BTX0 84 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 SLC17A2O00624 439 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 RASGRF2O14827 1237 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 CASKO14936 926 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 STAM2O75886 525 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 IGFBP1P08833 259 aaPredicted RBP3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 GSTT2P0CG29 244 aa3.14□□□□□ -1.91
RNU6-560P-201ENST00000364007 GSTT2BP0CG30 244 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms