RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 OCLNQ16625 522 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC22A16Q86VW1 577 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 LYSMD2Q8IV50 215 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CCDC116Q8IYX3 515 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 OR8J1Q8NGP2 316 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 OTUB1Q96FW1 271 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 WDR92Q96MX6 357 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 WFDC6Q9BQY6 131 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 TAPBPLQ9BX59 468 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 C6orf62Q9GZU0 229 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 OR51E2Q9H255 320 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 GIMAP4Q9NUV9 329 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 KLF15Q9UIH9 416 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC6A14Q9UN76 642 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CA5BQ9Y2D0 317 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 RPL36Q9Y3U8 105 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 KNL1Q8NG31 2342 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 A0A075B6Q4 140 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 A0A1W2PRQ8 180 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 OR10H3O60404 316 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 MED26O95402 600 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 PTTG1O95997 202 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 FHP07954 510 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CHRM4P08173 479 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 ENDOUP21128 410 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 POU1F1P28069 291 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 XKP51811 444 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 FOXK2Q01167 660 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 FUT5Q11128 374 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC25A30Q5SVS4 291 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 PRAMEF8Q5VWM4 474 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 PRAMEF7Q5VXH5 474 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CASP12Q6UXS9 341 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 COMTD1Q86VU5 262 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 ATCAYQ86WG3 371 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 WDR36Q8NI36 951 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 C1orf216Q8TAB5 229 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 NR4A3Q92570 626 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 TRNT1Q96Q11 434 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CHCHD6Q9BRQ6 235 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 YIPF4Q9BSR8 244 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 POLR2J3Q9H1A7 115 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 FSCN3Q9NQT6 498 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 A4GNTQ9UNA3 340 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 LOC110117498-PIK3R3F6TDL0 507 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 M0R3H8 397 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 BTN3A3O00478 584 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 EMC8O43402 210 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 PROM1O43490 865 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 ENTPD6O75354 484 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 UGT2B17O75795 530 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 SCG5P05408 212 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 HSMCR30P0CW71 290 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 C8orf89P0DMQ9 161 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 FEN1P39748 380 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 CCR5P51681 352 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 RPS15AP62244 130 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 LASP1Q14847 261 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 MED22Q15528 200 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 TCEA2Q15560 299 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 CSRP2Q16527 193 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 TSTQ16762 297 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 INAVAQ3KP66 663 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 PGBD2Q6P3X8 592 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 TMEM107Q6UX40 140 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 VN1R4Q7Z5H5 301 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 NRROSQ86YC3 692 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 CADM3Q8N126 398 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 PIK3R3Q92569 461 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 TMEM80Q96HE8 168 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 CENPOQ9BU64 300 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 RXFP3Q9NSD7 469 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF624Q9P2J8 865 aaPredicted RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 SLC9A8Q9Y2E8 581 aa13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 LSM2Q9Y333 95 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 MDC1Q14676 2089 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-203ENST00000358028 NCOR2Q9Y618 2525 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 A0A0G2JPF8 293 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 A0A1W2PPC4 97 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 A0A1W2PS29 197 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 HNRNPCL2B2RXH8 293 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 HNRNPCL3B7ZW38 293 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 H0Y8X5 98 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 AQP9O43315 295 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 KIAA0513O60268 411 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 ZNF806P0C7X5 589 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 HNRNPCL4P0DMR1 293 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 CD27P26842 260 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 BTN3A2P78410 334 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 PRR5P85299 388 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 RGS1Q08116 209 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 DNASE1L3Q13609 305 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 CEBPEQ15744 281 aa13.38□□□□□ -0.27
NIPAL3-203ENST00000358028 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms