RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 PPP3CBP16298 524 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 CNTFP26441 200 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 PTGDSP41222 190 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 HNRNPH2P55795 449 aaKnown RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 GLE1Q53GS7 698 aaKnown RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 CYP20A1Q6UW02 462 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 RAB3IL1Q8TBN0 382 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 SMAP2Q8WU79 429 aaPredicted RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 IFT81Q8WYA0 676 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 ROBO4Q8WZ75 1007 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 FMO2Q99518 471 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 OR10A5Q9H207 317 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 CDC42EP4Q9H3Q1 356 aaKnown RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 DDX31Q9H8H2 851 aaKnown RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 WDR41Q9HAD4 459 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 EHD3Q9NZN3 535 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 LPAR3Q9UBY5 353 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 DMGDHQ9UI17 866 aaKnown RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 RNF11Q9Y3C5 154 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 MAGED1Q9Y5V3 778 aaPredicted RBP14.26□□□□□ -0.13
DDX55-202ENST00000354291 CLOCKO15516 846 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 SIX3O95343 332 aaPredicted RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 SLC35E2P0CK97 266 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 COL6A2P12110 1019 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 SRD5A2P31213 254 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 THBS2P35442 1172 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 BSGP35613 385 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 ARL1P40616 181 aaPredicted RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 SNTA1Q13424 505 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 TSNAXIP1Q2TAA8 658 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 TMEM249Q2WGJ8 235 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 TECRLQ5HYJ1 363 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 OR5M10Q6IEU7 315 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 DNM1P46Q6ZS02 220 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 PLCZ1Q86YW0 608 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 PLD6Q8N2A8 252 aaKnown RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 ZNF615Q8N8J6 731 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 LILRB1Q8NHL6 650 aaPredicted RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 WDR20Q8TBZ3 569 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 HGDQ93099 445 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 FBXW5Q969U6 566 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 PHF21BQ96EK2 531 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 SERPINI1Q99574 410 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 NTMT1Q9BV86 223 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 NOL11Q9H8H0 719 aaKnown RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 CXorf21Q9HAI6 301 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 GDF2Q9UK05 429 aaPredicted RBP14.25□□□□□ -0.13
DDX55-202ENST00000354291 DKKL1Q9UK85 242 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 FBXL2Q9UKC9 423 aa14.25□□□□□ -0.13
DDX55-202ENST00000354291 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 A0A0A6YYD5 115 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 A0A1W2PS29 197 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 FAM234BA2RU67 622 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 STX16-NPEPL1H3BU86 382 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 STX16O14662 325 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 KCNAB3O43448 404 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 SSX4O60224 188 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 SMIM24O75264 130 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 EEDO75530 441 aaKnown RBP14.24□□□□□ -0.13
DDX55-202ENST00000354291 CT62P0C5K7 136 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 FAM58BPP0C7Q3 252 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 DANCRP0C864 163 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 CTAGE8P0CG41 777 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 NAGAP17050 411 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 SRD5A1P18405 259 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 DPP4P27487 766 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 GALNSP34059 522 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 MAGEA12P43365 314 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 NEK2P51955 445 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 CCNG1P51959 295 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 CASP9P55211 416 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 FGFBP1Q14512 234 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 BCL2A1Q16548 175 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 MRM1Q6IN84 353 aaKnown RBP14.24□□□□□ -0.13
DDX55-202ENST00000354291 NUDT13Q86X67 352 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 CTAGE4Q8IX94 777 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 GALNT12Q8IXK2 581 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 ARIH2OSQ8N7S6 290 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 PTGR2Q8N8N7 351 aaPredicted RBP14.24□□□□□ -0.13
DDX55-202ENST00000354291 NEUROG1Q92886 237 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 OMA1Q96E52 524 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 PAFAH2Q99487 392 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 PINK1Q9BXM7 581 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 ZNF717Q9BY31 904 aaPredicted RBP14.24□□□□□ -0.13
DDX55-202ENST00000354291 ZNF180Q9UJW8 692 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 ASB4Q9Y574 426 aa14.24□□□□□ -0.13
DDX55-202ENST00000354291 A0A1W2PP18 115 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 A0A1W2PR48 441 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 PRAMEF25A6NGN4 478 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 H0YC42 278 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 OR7A17O14581 309 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 ZIC3O60481 467 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 UGT2B11O75310 529 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 SEMA3DO95025 777 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 NR2F6P10588 404 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 PEPDP12955 493 aa14.23□□□□□ -0.13
DDX55-202ENST00000354291 TPD52P55327 224 aaPredicted RBP14.23□□□□□ -0.13
DDX55-202ENST00000354291 UBAP2Q5T6F2 1119 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms