RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 MSMO1Q15800 293 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 OR51L1Q8NGJ5 315 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 PCDHGA7Q9Y5G6 932 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 ACTL7AQ9Y615 435 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 METTL15A6NJ78 407 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 GRM5P41594 1212 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 IL17AQ16552 155 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 GLB1L2Q8IW92 636 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 METTL21AQ8WXB1 218 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 FDXACB1Q9BRP7 624 aaPredicted RBP12.01□□□□□ -0.49
COL6A3-203ENST00000353578 SLC2A6Q9UGQ3 507 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 SDHDO14521 159 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 PRNPP04156 253 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 FHP07954 510 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 KDELR2P33947 212 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 GCGRP47871 477 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 SEC61A1P61619 476 aaKnown RBP12.01□□□□□ -0.49
COL6A3-203ENST00000353578 ZNF74Q16587 644 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 CLLU1Q5K131 121 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 DBX2Q6ZNG2 339 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 MR1Q95460 341 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 YY2O15391 372 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 SEPT4O43236 478 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 PER3P56645 1201 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 DECR1Q16698 335 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 BCL7AQ4VC05 210 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 ZNF559Q9BR84 538 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 ALG8Q9BVK2 526 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 VNN3Q9NY84 501 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 CACFD1Q9UGQ2 172 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 A0A0A6YYH2 397 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 A6NJ64 397 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 IDSP22304 550 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 WEE1P30291 646 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 PPP1R26Q5T8A7 1209 aaPredicted RBP12.01□□□□□ -0.49
COL6A3-203ENST00000353578 OR5M8Q8NGP6 311 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
COL6A3-203ENST00000353578 TMEM82A0PJX8 343 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ADAM23O75077 832 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ADH7P40394 386 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 MSS51Q4VC12 460 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 C9orf57Q5W0N0 161 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 SERPINA9Q86WD7 417 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 MCOLN1Q9GZU1 580 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 OR2AG1Q9H205 316 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 TMPRSS4Q9NRS4 437 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 SEMA4GQ9NTN9 838 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 SLC22A7Q9Y694 548 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 YDJCA8MPS7 323 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 C1RP00736 705 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ALDOAP04075 364 aaKnown RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 ALDH2P05091 517 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 INHBCP55103 352 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ACOT6Q3I5F7 207 aaPredicted RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 ZNF679Q8IYX0 411 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 YIPF5Q969M3 257 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 UBQLN3Q9H347 655 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ASB6Q9NWX5 421 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 KLK14Q9P0G3 267 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 NDOR1Q9UHB4 597 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ALAS2P22557 587 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 BDNFP23560 247 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 TNFSF8P32971 234 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 CAV2P51636 162 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 TOR2AQ5JU69 321 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 SLC35D2Q76EJ3 337 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 RBP7Q96R05 134 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 MYOZ2Q9NPC6 264 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 KIF26BQ2KJY2 2108 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 FAM214AQ32MH5 1076 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 SULF2Q8IWU5 870 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 OR8D2Q9GZM6 311 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 COQ3Q9NZJ6 369 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 CPNE7Q9UBL6 633 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 GHRLQ9UBU3 117 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 PSMD9O00233 223 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 IRAK2O43187 625 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 JUNP05412 331 aaKnown RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 MADCAM1Q13477 382 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 DPEP3Q9H4B8 488 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 MCCC2Q9HCC0 563 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 MROH6A6NGR9 719 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 POP4O95707 220 aaKnown RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 F2RL1P55085 397 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 BRAT1Q6PJG6 821 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 SLC51AQ86UW1 340 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 NHLRC2Q8NBF2 726 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 OR13C3Q8NGS6 347 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 ZNF668Q96K58 619 aaPredicted RBP12□□□□□ -0.49
COL6A3-203ENST00000353578 CMKLR1Q99788 373 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 CD244Q9BZW8 370 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 FBXW11Q9UKB1 542 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 INSRRP14616 1297 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 OR1J2Q8NGS2 313 aa12□□□□□ -0.49
COL6A3-203ENST00000353578 PHYHIPLQ96FC7 376 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms