RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CR2P20023 1033 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 TRIM23P36406 574 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 KIR2DL1P43626 348 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 KIR2DL2P43627 348 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 BRCC3P46736 316 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 REEP5Q00765 189 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 IL18R1Q13478 541 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CEACAM7Q14002 265 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 PTPRCAPQ14761 206 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 TAB1Q15750 504 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 EXT1Q16394 746 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 RIPPLY2Q5TAB7 128 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 LAIR1Q6GTX8 287 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CNIH2Q6PI25 160 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 FBXO46Q6PJ61 603 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 CDHR3Q6ZTQ4 885 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ZNF551Q7Z340 670 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 PTAR1Q7Z6K3 402 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 TMEM217Q8N7C4 229 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CYP2W1Q8TAV3 490 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CORO2AQ92828 525 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 GNRHR2Q96P88 292 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 IL12RB2Q99665 862 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SERTAD4Q9NUC0 356 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 RLIMQ9NVW2 624 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CHRNA9Q9UGM1 479 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ZNF639Q9UID6 485 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 LEF1Q9UJU2 399 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 KCNK6Q9Y257 313 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 FARSAQ9Y285 508 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 ETV7Q9Y603 341 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ANXA2P2A6NMY6 339 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 GLCEO94923 617 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 TFP02787 698 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 PNLIPP16233 465 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 FUT4P22083 530 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 GDI2P50395 445 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 KIAA1024LP59773 190 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CNTN2Q02246 1040 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 PMS2P3Q13401 168 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ATP13A5Q4VNC0 1218 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 PRSS36Q5K4E3 855 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 PAPD4Q6PIY7 484 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 BRINP3Q76B58 766 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SMIM15Q7Z3B0 74 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ZAR1Q86SH2 424 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 RBFAQ8N0V3 343 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SP7Q8TDD2 431 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 BLOC1S5Q8TDH9 187 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 NECTIN4Q96NY8 510 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 OR52B2Q96RD2 323 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 RAD9AQ99638 391 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 WDR77Q9BQA1 342 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 UTP23Q9BRU9 249 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 IKZF4Q9H2S9 585 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SLCO5A1Q9H2Y9 848 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SLA2Q9H6Q3 261 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 KAT8Q9H7Z6 458 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 ZNF302Q9NR11 478 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 A4D1N5 150 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 METTL21EPA6NDL7 271 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CCDC182A6NF36 153 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SULT2B1O00204 365 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SLC16A7O60669 478 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SLC19A2O60779 497 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 SULT1C4O75897 302 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CRYZL1O95825 349 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 HPRP00739 348 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 RD3LP0DJH9 198 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 DARSP14868 501 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 HOXC13P31276 330 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ANXA11P50995 505 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 RHOBP62745 196 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 TRA2BP62995 288 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 PUDPQ08623 228 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CDH17Q12864 832 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 MANEALQ5VSG8 457 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 AGBL4Q5VU57 503 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 CACUL1Q86Y37 369 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ZNF384Q8TF68 577 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 PABPC5Q96DU9 382 aaKnown RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 AURKBQ96GD4 344 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 ZNF641Q96N77 438 aaPredicted RBP5.63□□□□□ -1.51
RFC1-201ENST00000349703 SPATA25Q9BR10 227 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ABCG2Q9UNQ0 655 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 ASF1AQ9Y294 204 aa5.63□□□□□ -1.51
RFC1-201ENST00000349703 TRAV18A0A075B6X5 111 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 TMEM202A6NGA9 273 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 FBLL1A6NHQ2 334 aaKnown RBP5.62□□□□□ -1.51
RFC1-201ENST00000349703 RFPL2O75678 378 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 ONECUT2O95948 504 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 CBLP22681 906 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 TCF7P36402 384 aaPredicted RBP5.62□□□□□ -1.51
RFC1-201ENST00000349703 HPCAL1P37235 193 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 MAPKAPK2P49137 400 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 CPSF6Q16630 551 aaKnown RBP eCLIP5.62□□□□□ -1.51
RFC1-201ENST00000349703 KLHL12Q53G59 568 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 DCLRE1AQ6PJP8 1040 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 OFCC1Q8IZS5 231 aa5.62□□□□□ -1.51
RFC1-201ENST00000349703 METTL4Q8N3J2 472 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms