RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 SIMC1Q8NDZ2 872 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 TNIP2Q8NFZ5 429 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 OR7G2Q8NG99 324 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 PTGES2Q9H7Z7 377 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 L2HGDHQ9H9P8 463 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 LRTM1Q9HBL6 345 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 TMED5Q9Y3A6 229 aa16.2■□□□□ 0.18
CKLF-202ENST00000345436 POLR3HQ9Y535 204 aaPredicted RBP16.2■□□□□ 0.18
CKLF-202ENST00000345436 MBD3L4A6NDZ8 208 aaPredicted RBP16.19■□□□□ 0.18
CKLF-202ENST00000345436 MBD3L3A6NE82 208 aaPredicted RBP16.19■□□□□ 0.18
CKLF-202ENST00000345436 MBD3L5A6NJ08 208 aaPredicted RBP16.19■□□□□ 0.18
CKLF-202ENST00000345436 PRPH2P23942 346 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 GPC1P35052 558 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 SOX18P35713 384 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 PTGDSP41222 190 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 DGKQP52824 942 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 EEFSECP57772 596 aaKnown RBP16.19■□□□□ 0.18
CKLF-202ENST00000345436 SLC18A2Q05940 514 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 GAB1Q13480 694 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 FBXL19-AS1Q494R0 122 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 SH2D4BQ5SQS7 431 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 TRIM42Q8IWZ5 723 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 CEP70Q8NHQ1 597 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 MBD3L2Q8NHZ7 208 aaPredicted RBP16.19■□□□□ 0.18
CKLF-202ENST00000345436 EPS8L3Q8TE67 593 aaKnown RBP16.19■□□□□ 0.18
CKLF-202ENST00000345436 FAM222BQ8WU58 562 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 ELP4Q96EB1 424 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 SFXN2Q96NB2 322 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 ANKRA2Q9H9E1 313 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 PPP4R1LQ9P1A2 415 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 STOML1Q9UBI4 398 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 CBLCQ9ULV8 474 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 ABCG2Q9UNQ0 655 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 L3MBTL1Q9Y468 752 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 FBN2P35556 2912 aa16.19■□□□□ 0.18
CKLF-202ENST00000345436 NPIPB8E9PQR5 432 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 LINC01387J3KSC0 135 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 KCNH1O95259 989 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 GRK2P25098 689 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 MC3RP41968 323 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 ASMTP46597 345 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 DSCR4P56555 118 aaPredicted RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 KRTAP10-9P60411 292 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 GANABQ14697 944 aaKnown RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 BCL2A1Q16548 175 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 TMEM107Q6UX40 140 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 RNF165Q6ZSG1 346 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 SEM1Q6ZVN7 128 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 C10orf107Q8IVU9 208 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 C4orf33Q8N1A6 199 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 OR2L13Q8N349 312 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 GOT1L1Q8NHS2 421 aaPredicted RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.18■□□□□ 0.18
CKLF-202ENST00000345436 WNT2BQ93097 391 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 ZBED6CLQ96FA7 236 aaPredicted RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 AMDHD1Q96NU7 426 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 CCT7Q99832 543 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 ROPN1BQ9BZX4 212 aaPredicted RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 GLIPR2Q9H4G4 154 aa16.18■□□□□ 0.18
CKLF-202ENST00000345436 ROPN1Q9HAT0 212 aaPredicted RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 INTS1Q8N201 2190 aaKnown RBP16.18■□□□□ 0.18
CKLF-202ENST00000345436 TMEM114B3SHH9 223 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 PDPK1O15530 556 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 TMIGD3P0DMS9 266 aaPredicted RBP16.17■□□□□ 0.18
CKLF-202ENST00000345436 CD1EP15812 388 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 DPP4P27487 766 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 MAPK1P28482 360 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 EVI2BP34910 448 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 RPL3P39023 403 aaKnown RBP16.17■□□□□ 0.18
CKLF-202ENST00000345436 DLX5P56178 289 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 SRYQ05066 204 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 DESI1Q6ICB0 168 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 R3HCC1LQ7Z5L2 792 aaKnown RBP16.17■□□□□ 0.18
CKLF-202ENST00000345436 EFHD2Q96C19 240 aaPredicted RBP16.17■□□□□ 0.18
CKLF-202ENST00000345436 PPCDCQ96CD2 204 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 ZNF764Q96H86 408 aaPredicted RBP16.17■□□□□ 0.18
CKLF-202ENST00000345436 APOPT1Q96IL0 206 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 SFXN3Q9BWM7 321 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 MKS1Q9NXB0 559 aa16.17■□□□□ 0.18
CKLF-202ENST00000345436 DNAJB12Q9NXW2 375 aaKnown RBP16.17■□□□□ 0.18
CKLF-202ENST00000345436 PDZD2O15018 2839 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 TUBAL3A6NHL2 446 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 EEF1E1-BLOC1S5C9J1V9 151 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 UPK1AO00322 258 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 EEF1E1O43324 174 aaKnown RBP16.16■□□□□ 0.18
CKLF-202ENST00000345436 NPHS1O60500 1241 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 RCBTB2O95199 551 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 FGF4P08620 206 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 PRPS2P11908 318 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 PEPDP12955 493 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 SERPINB5P36952 375 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 DIO3P55073 304 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 MANFP55145 182 aaKnown RBP16.16■□□□□ 0.18
CKLF-202ENST00000345436 PSG6Q00889 435 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 FLYWCH1Q4VC44 716 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 FBXW10Q5XX13 1052 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 LRIG3Q6UXM1 1119 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 NPSR1Q6W5P4 371 aa16.16■□□□□ 0.18
CKLF-202ENST00000345436 P4HA3Q7Z4N8 544 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms