RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SLCO6A1Q86UG4 719 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 TRUB1Q8WWH5 349 aaKnown RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 FCGR1BQ92637 280 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 SELENONQ9NZV5 590 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 MKLN1Q9UL63 735 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 DSPPQ9NZW4 1301 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 CHST10O43529 356 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 ZIC2O95409 532 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 AGR2O95994 175 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 GABRB1P18505 474 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 C21orf33P30042 268 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 OCA2Q04671 838 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 DUSP5Q16690 384 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 NLGN4XQ8N0W4 816 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 ARHGEF39Q8N4T4 335 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 SLC7A13Q8TCU3 470 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 ABTB1Q969K4 478 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 SOHLH2Q9NX45 425 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 HCN3Q9P1Z3 774 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 C19orf53Q9UNZ5 99 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 CCDC88CQ9P219 2028 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 M0R129 80 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 MAGEB3O15480 346 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 SRPX2O60687 465 aaPredicted RBP17.37■□□□□ 0.37
HOXA9-201ENST00000343483 CDK1P06493 297 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 CD36P16671 472 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 POU1F1P28069 291 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 MLLT3P42568 568 aaPredicted RBP17.37■□□□□ 0.37
HOXA9-201ENST00000343483 CTSKP43235 329 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 TEKQ02763 1124 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 PTGES3Q15185 160 aaKnown RBP17.37■□□□□ 0.37
HOXA9-201ENST00000343483 PRTGQ2VWP7 1150 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 FHL5Q5TD97 284 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 NKAIN2Q5VXU1 208 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 HEPHL1Q6MZM0 1159 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 ITPAQ9BY32 194 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 FKBP14Q9NWM8 211 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 KLHL3Q9UH77 587 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 SIT1Q9Y3P8 196 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 CORINQ9Y5Q5 1042 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 LAMA1P25391 3075 aa17.37■□□□□ 0.37
HOXA9-201ENST00000343483 RHPN2P1A8MT19 583 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 FRS3O43559 492 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 MED26O95402 600 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 OXSR1O95747 527 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 ADAP00813 363 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 ACP2P11117 423 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 TGFBR2P37173 567 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 OPRL1P41146 370 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 CDC42P60953 191 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 DMWDQ09019 674 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 TBCEQ15813 527 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 C14orf28Q4W4Y0 310 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 TMEM236Q5W0B7 351 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 C17orf82Q86X59 251 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 ANKRD9Q96BM1 317 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 PALMDQ9NP74 551 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 GPR83Q9NYM4 423 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 A0A1W2PRQ8 180 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 K7ESF4 209 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 BCAT2O15382 392 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 PIAS2O75928 621 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 CHMP24386 653 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 AFF3P51826 1226 aaKnown RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 CRISP1P54107 249 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 NCS1P62166 190 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 NR1D2Q14995 579 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 EXOSC7Q15024 291 aaKnown RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 DGUOKQ16854 277 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 PRICKLE4Q2TBC4 344 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 CCNJQ5T5M9 372 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 FRRS1Q6ZNA5 592 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 Q6ZNX1 250 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 OR52P1PQ8NH57 321 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 PRRC1Q96M27 445 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 UCK2Q9BZX2 261 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 MAT2BQ9NZL9 334 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 FTSJ1Q9UET6 329 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 MGAT4BQ9UQ53 548 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 GPR55Q9Y2T6 319 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-201ENST00000343483 WDR45Q9Y484 360 aa17.36■□□□□ 0.37
HOXA9-201ENST00000343483 IGHV5-51A0A0C4DH38 117 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SYT5O00445 386 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 OR10H2O60403 315 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 CDC123O75794 336 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 AVPR1BP47901 424 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 UGT2B15P54855 530 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 TARDBPQ13148 414 aaKnown RBP eCLIP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SRSF5Q13243 272 aaKnown RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 NDUFA9Q16795 377 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 PODNL1Q6PEZ8 512 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 STX19Q8N4C7 294 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 RPL3LQ92901 407 aaKnown RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SLC38A4Q969I6 547 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SH3YL1Q96HL8 342 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 PRR14Q9BWN1 585 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 TRIM45Q9H8W5 580 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 CACYBPQ9HB71 228 aaKnown RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SLC6A14Q9UN76 642 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms