RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CSN1S1P47710 185 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 RANP62826 216 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SRPXP78539 464 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 MRPS34P82930 218 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 THOC6Q86W42 341 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ACER1Q8TDN7 264 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ZUFSPQ96AP4 578 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 XKRY2A2RUG3 117 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 B4DXG7 233 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 EFNA3P52797 238 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SF3A2Q15428 464 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 KIAA0930Q6ICG6 404 aaPredicted RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 TSSK4Q6SA08 328 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 NPAS4Q8IUM7 802 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 HNF4GQ14541 408 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 LCLAT1Q6UWP7 414 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 HOXD1Q9GZZ0 328 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 DVL2O14641 736 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 RAB3AP20336 220 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 HTR3AP46098 478 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 MLLT10P55197 1068 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 LPPQ93052 612 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 FBXL8Q96CD0 374 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 PIKFYVEQ9Y2I7 2098 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SNRNP70P08621 437 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ARAFP10398 606 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 LINGO4Q6UY18 593 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SLC24A5Q71RS6 500 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 FOXRED1Q96CU9 486 aaPredicted RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ZNFX1Q9P2E3 1918 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 C9JVG2 144 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 DPM1O60762 260 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ARRB1P49407 418 aaPredicted RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 TIGD3Q6B0B8 471 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 MR1Q95460 341 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 OXSMQ9NWU1 459 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 GMEB2Q9UKD1 530 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ADAM29Q9UKF5 820 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 TP53P04637 393 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 GRM5P41594 1212 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 RAC1P63000 192 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 SCML4Q8N228 414 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 MINDY1Q8N5J2 469 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 PLD5Q8N7P1 536 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ANXA7P20073 488 aaKnown RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 WASP42768 502 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ACTBL2Q562R1 376 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 TMEM201Q5SNT2 666 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 C1orf123Q9NWV4 160 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 VSX1Q9NZR4 365 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 PRSS51A0A1B0GVH4 220 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 KRBOX1C9JBD0 128 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 RASAL1O95294 804 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 MMP8P22894 467 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 TMEM198Q66K66 360 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 PNCKQ6P2M8 343 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 PET117Q6UWS5 81 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 OR4C5Q8NGB2 326 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF251Q9BRH9 671 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 SARDHQ9UL12 918 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 AGPAT2O15120 278 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 TCAPO15273 167 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 MFGE8Q08431 387 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 LIPJQ5W064 366 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 HIST2H3AQ71DI3 136 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 DCLRE1CQ96SD1 692 aaKnown RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 EXO1Q9UQ84 846 aaKnown RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 NAV1Q8NEY1 1877 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 RAB13P51153 203 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 RFPL4BQ6ZWI9 263 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 PRDM9Q9NQV7 894 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 MYOTQ9UBF9 498 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 YY2O15391 372 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 MITFO75030 526 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 KCNK2O95069 426 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ADH4P08319 380 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 CDKN2BP42772 138 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 BDKRB1P46663 353 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 PLA2G7Q13093 441 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 RBM12BQ8IXT5 1001 aaKnown RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF599Q96NL3 588 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 NKX3-1Q99801 234 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 UGDHO60701 494 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 USP2O75604 605 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 RNF111Q6ZNA4 994 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF587Q96SQ5 575 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-201ENST00000342988 DOHHQ9BU89 302 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 ST6GALNAC5Q9BVH7 336 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 CPNE7Q9UBL6 633 aa16.81■□□□□ 0.28
SMAD4-201ENST00000342988 B4GALT4O60513 344 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 MAFO75444 373 aaPredicted RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ETV1P50549 477 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 RPS15P62841 145 aaKnown RBP16.8■□□□□ 0.28
SMAD4-201ENST00000342988 AKR1C1Q04828 323 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 ZMAT1Q5H9K5 638 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 L3MBTL4Q8NA19 623 aa16.8■□□□□ 0.28
SMAD4-201ENST00000342988 SOCS2O14508 198 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms