RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 LHX9Q9NQ69 397 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 MAN2C1Q9NTJ4 1040 aa13.53□□□□□ -0.24
CPSF7-201ENST00000340437 RGS13O14921 159 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 LIMS3P0CW19 117 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 LIMS4P0CW20 117 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 ACP2P11117 423 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 ADH5P11766 374 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 EPCAMP16422 314 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 CERS1P27544 350 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 GALK2Q01415 458 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 SLC3A1Q07837 685 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 TGM3Q08188 693 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 SLC9A5Q14940 896 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 CCNJQ5T5M9 372 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 OR10H4Q8NGA5 316 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 TMEM163Q8TC26 289 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.24
CPSF7-201ENST00000340437 C17orf50Q8WW18 174 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 SAMD8Q96LT4 415 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 COQ10AQ96MF6 247 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 OR52A5Q9H2C5 316 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 TMEM245Q9H330 911 aa13.52□□□□□ -0.24
CPSF7-201ENST00000340437 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.24
CPSF7-201ENST00000340437 GABRPO00591 440 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 PAICSP22234 425 aaKnown RBP13.52□□□□□ -0.25
CPSF7-201ENST00000340437 IFNA8P32881 189 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 SLC1A3P43003 542 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 ASAH1Q13510 395 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 GPR68Q15743 365 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 PLBD1Q6P4A8 553 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 LCTLQ6UWM7 567 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 NPIPA5A0A0B4J1W7 369 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 A0A0G2JMP0 313 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 A0A0X1KG70 313 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 NPIPA7E9PJI5 369 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 EPPINO95925 133 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 PAHP00439 452 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 NPIPA8P0DM63 369 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 TRHRP34981 398 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-201ENST00000340437 EFR3AQ14156 821 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 ARHGEF6Q15052 776 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 UBE3DQ7Z6J8 389 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 SIMC1Q8NDZ2 872 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 OR4M2Q8NGB6 313 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 TMEM255BQ8WV15 326 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 SLX1AQ9BQ83 275 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 NPAP1Q9NZP6 1156 aa13.52□□□□□ -0.25
CPSF7-201ENST00000340437 MAPK9P45984 424 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 KHKP50053 298 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
CPSF7-201ENST00000340437 TAS2R38P59533 333 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 TOR1AIP1Q5JTV8 583 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 OR8H1Q8NGG4 311 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 PIGXQ8TBF5 258 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 A0A1W2PRQ8 180 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 C12orf71A8MTZ7 269 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 INMT-MINDY4F8WBC2 141 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SPINT1O43278 529 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 OR2B3O76000 313 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 CXCL10P02778 98 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ALPPP05187 535 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 GKN3PP0CG01 181 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 CEBPBP17676 345 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ITGB7P26010 798 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ACVR1BP36896 505 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SRP9P49458 86 aaKnown RBP13.51□□□□□ -0.25
CPSF7-201ENST00000340437 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SAMD12Q8N8I0 201 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 MCHR1Q99705 422 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ZBP1Q9H171 429 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 COQ3Q9NZJ6 369 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 TNFRSF10DQ9UBN6 386 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ICKQ9UPZ9 632 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 DOCK9Q9BZ29 2069 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 GNB5O14775 395 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 UBXN7O94888 489 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SYPP08247 313 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SOX9P48436 509 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 TMEM201Q5SNT2 666 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SYT9Q86SS6 491 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 KLHDC8AQ8IYD2 350 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 CLDN22Q8N7P3 220 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ADAMTS15Q8TE58 950 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SMG7Q92540 1137 aaKnown RBP13.51□□□□□ -0.25
CPSF7-201ENST00000340437 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SPATA5L1Q9BVQ7 753 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 FAIM2Q9BWQ8 316 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ZSCAN32Q9NX65 697 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 ING3Q9NXR8 418 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 SPTBP11277 2137 aa13.51□□□□□ -0.25
CPSF7-201ENST00000340437 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
CPSF7-201ENST00000340437 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms