RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FMO6PO60774 539 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 FAM83HQ6ZRV2 1179 aaPredicted RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 CCDC80Q76M96 950 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 SLC23A2Q9UGH3 650 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 H2BFMP0C1H6 154 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 XIAPP98170 497 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 DENND5AQ6IQ26 1287 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 GFRALQ6UXV0 394 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 RNF175Q8N4F7 328 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 ZNF578Q96N58 590 aaPredicted RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 DHRS4Q9BTZ2 278 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 DEFB127Q9H1M4 99 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 MEN1O00255 615 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 KHDRBS3O75525 346 aaKnown RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 HMGN2P05204 90 aaKnown RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 DSG2Q14126 1118 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 VWA2Q5GFL6 755 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 CDHR3Q6ZTQ4 885 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 OR8J3Q8NGG0 315 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 TSPEARQ8WU66 669 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 SLC46A1Q96NT5 459 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 ACPTQ9BZG2 426 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 SOCS2O14508 198 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 PNMTP11086 282 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 EDNRAP25101 427 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 DPP4P27487 766 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 ID4P47928 161 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 ZXDBP98169 803 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 TIGD6Q17RP2 521 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SLCO4C1Q6ZQN7 724 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 VASH2Q86V25 355 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 PMM1Q92871 262 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MENTQ9BUN1 341 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SMPD3Q9NY59 655 aaPredicted RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 GPR160Q9UJ42 338 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MOSPD3O75425 235 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 IDUAP35475 653 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 KIR2DL1P43626 348 aaPredicted RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 VMACQ2NL98 169 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MSANTD1Q6ZTZ1 278 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MMP21Q8N119 569 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 LCORQ96JN0 433 aaPredicted RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 DDX28Q9NUL7 540 aaKnown RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 ING3Q9NXR8 418 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 A0A075B6Q4 140 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 GGT3PA6NGU5 568 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 SOX14O95416 240 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 CAPGP40121 348 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 IL11RAQ14626 422 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 UCKL1Q9NWZ5 548 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 LOC102723532A0A0G2JNH3 316 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 AQP12BA6NM10 295 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 HCKP08631 526 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MSL3P1P0C860 447 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SLITRK4Q8IW52 837 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 AQP12AQ8IXF9 295 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 PARP8Q8N3A8 854 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 METTL4Q8N3J2 472 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 FTMTQ8N4E7 242 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 CBR4Q8N4T8 237 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 PITX2Q99697 317 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SLC30A3Q99726 388 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 PIGQQ9BRB3 760 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SLC6A16Q9GZN6 736 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 LRFN1Q9P244 771 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 TNFRSF10DQ9UBN6 386 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 AP4B1Q9Y6B7 739 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 B4GAT1O43505 415 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MED26O95402 600 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 ITGA5P08648 1049 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
LIN54-201ENST00000340417 NANOGP8Q6NSW7 305 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 FITM2Q8N6M3 262 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 SFXN5Q8TD22 340 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MSLNLQ96KJ4 702 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 NANOGQ9H9S0 305 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 KIAA1217Q5T5P2 1943 aa12.04□□□□□ -0.48
LIN54-201ENST00000340417 MICAL3Q7RTP6 2002 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 GABRR3A8MPY1 467 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 TYROBPO43914 113 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 ADAM23O75077 832 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 PRKCAP17252 672 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 DCTP40126 519 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 DYNC1I2Q13409 638 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 DGUOKQ16854 277 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 CPEB2Q7Z5Q1 589 aaKnown RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 CLVS1Q8IUQ0 354 aaPredicted RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 CCDC54Q8NEL0 328 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 OR5D16Q8NGK9 328 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
LIN54-201ENST00000340417 PCDHB10Q9UN67 800 aa12.03□□□□□ -0.48
LIN54-201ENST00000340417 WDR37Q9Y2I8 494 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms