RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SLC6A15Q9H2J7 730 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 METTL7AQ9H8H3 244 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 AKTIPQ9H8T0 292 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 ACKR4Q9NPB9 350 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 PNPLA3Q9NST1 481 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 ACSS1Q9NUB1 689 aaPredicted RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 PNPOQ9NVS9 261 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 QPCTLQ9NXS2 382 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 ASIC5Q9NY37 505 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 NTMQ9P121 344 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 C15orf41Q9Y2V0 281 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 TRGV5A0A0B4J1U4 118 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 OR14I1A6ND48 311 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 PRAMEF25A6NGN4 478 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 B4DXG7 233 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 HCN1O60741 890 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 SNNO75324 88 aaPredicted RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 REM1O75628 298 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 G6PDP11413 515 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 PRPS2P11908 318 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 PTPN6P29350 595 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 HPCAL1P37235 193 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 MANFP55145 182 aaKnown RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 SNTA1Q13424 505 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 GAB1Q13480 694 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 GXYLT1Q4G148 440 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 TIGD3Q6B0B8 471 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 SLC30A6Q6NXT4 461 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 MTFR2Q6P444 385 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 RPTNQ6XPR3 784 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 LARP4Q71RC2 724 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKN-201ENST00000338468 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 PACS2Q86VP3 889 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 ZNF808Q8N4W9 903 aaPredicted RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 OR5M9Q8NGP3 310 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 PHF10Q8WUB8 498 aaKnown RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 EFHD2Q96C19 240 aaPredicted RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 COQ8BQ96D53 544 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 ZBED6CLQ96FA7 236 aaPredicted RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 OSBPL11Q9BXB4 747 aa13.94□□□□□ -0.18
PRKN-201ENST00000338468 SIRT3Q9NTG7 399 aaPredicted RBP13.94□□□□□ -0.18
PRKN-201ENST00000338468 FREM3P0C091 2139 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 C17orf51A8MQB3 221 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 GNB5O14775 395 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 SNPHO15079 494 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 ABCB7O75027 752 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 HPNP05981 417 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 GDF1P27539 372 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 MASP1P48740 699 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 TRPC1P48995 793 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 MAN2A2P49641 1150 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 PNLIPRP2P54317 469 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 GAS1P54826 345 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 DIO3P55073 304 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 C21orf58P58505 322 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 PSPHP78330 225 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 MLC1Q15049 377 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 SMU1Q2TAY7 513 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 CYP27C1Q4G0S4 372 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 EXOSC6Q5RKV6 272 aaKnown RBP13.93□□□□□ -0.18
PRKN-201ENST00000338468 AGBL2Q5U5Z8 902 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 ANGPTL8Q6UXH0 198 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 NEIL3Q8TAT5 605 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 NUF2Q9BZD4 464 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 LDAHQ9H6V9 325 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 EQTNQ9NQ60 294 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 FLRT3Q9NZU0 649 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 B4GALT7Q9UBV7 327 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 OR10H1Q9Y4A9 318 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 PDZD2O15018 2839 aa13.93□□□□□ -0.18
PRKN-201ENST00000338468 GXYLT2A0PJZ3 443 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 BCKDKO14874 412 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 IGKV1D-16P01601 117 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 CYP4B1P13584 511 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 GPC1P35052 558 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 RPL3P39023 403 aaKnown RBP13.92□□□□□ -0.18
PRKN-201ENST00000338468 CLDN8P56748 225 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 ART3Q13508 389 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 EFR3AQ14156 821 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 RTL6Q6ICC9 239 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 GDF7Q7Z4P5 450 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 NUP43Q8NFH3 380 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 PSMA8Q8TAA3 256 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 TMCO6Q96DC7 493 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 TP63Q9H3D4 680 aaPredicted RBP13.92□□□□□ -0.18
PRKN-201ENST00000338468 MEAF6Q9HAF1 191 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
PRKN-201ENST00000338468 KLRF1Q9NZS2 232 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 CBLCQ9ULV8 474 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 EIF3LQ9Y262 564 aaKnown RBP13.92□□□□□ -0.18
PRKN-201ENST00000338468 FAM215AQ9Y5M1 114 aa13.92□□□□□ -0.18
PRKN-201ENST00000338468 SETD2Q9BYW2 2564 aaPredicted RBP13.92□□□□□ -0.18
PRKN-201ENST00000338468 A0A1W2PRB8 838 aa13.91□□□□□ -0.18
PRKN-201ENST00000338468 SDHDO14521 159 aa13.91□□□□□ -0.18
PRKN-201ENST00000338468 ANKRD28O15084 1053 aa13.91□□□□□ -0.18
PRKN-201ENST00000338468 EMC8O43402 210 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms