RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 SNTNA6NMZ2 147 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 H0Y8X5 98 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 LINC01565O15544 149 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 PRODHO43272 600 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 ACP2P11117 423 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 TRHRP34981 398 aaPredicted RBP16.59■□□□□ 0.25
LRCH3-201ENST00000334859 PBX2P40425 430 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 RPS15AP62244 130 aaKnown RBP16.59■□□□□ 0.25
LRCH3-201ENST00000334859 TSPAN31Q12999 210 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 KRR1Q13601 381 aaKnown RBP16.59■□□□□ 0.25
LRCH3-201ENST00000334859 FAM214AQ32MH5 1076 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 C3orf38Q5JPI3 329 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 OR2G6Q5TZ20 316 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 SDE2Q6IQ49 451 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 SHFQ7M4L6 423 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 LAX1Q8IWV1 398 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 LRRC25Q8N386 305 aaPredicted RBP16.59■□□□□ 0.25
LRCH3-201ENST00000334859 SLC16A11Q8NCK7 471 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 OR7G2Q8NG99 324 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 OR52P1PQ8NH57 321 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 GIMAP5Q96F15 307 aa16.59■□□□□ 0.25
LRCH3-201ENST00000334859 TRIM45Q9H8W5 580 aaPredicted RBP16.59■□□□□ 0.25
LRCH3-201ENST00000334859 AP3D1O14617 1153 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 ZIC2O95409 532 aaPredicted RBP16.58■□□□□ 0.25
LRCH3-201ENST00000334859 CH25HO95992 272 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 PTNP21246 168 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 GPR4P46093 362 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 MTNR1AP48039 350 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 WNT4P56705 351 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 SNRPNP63162 240 aaKnown RBP16.58■□□□□ 0.25
LRCH3-201ENST00000334859 RAB40BQ12829 278 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 CEBPEQ15744 281 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 CCBE1Q6UXH8 406 aaPredicted RBP16.58■□□□□ 0.25
LRCH3-201ENST00000334859 FLCNQ8NFG4 579 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 NR4A3Q92570 626 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 CDS1Q92903 461 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 ELSPBP1Q96BH3 223 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 MS4A4EQ96PG1 132 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 SDHCQ99643 169 aaPredicted RBP16.58■□□□□ 0.25
LRCH3-201ENST00000334859 CCDC32Q9BV29 185 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 PRRG3Q9BZD7 231 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 POLMQ9NP87 494 aaPredicted RBP16.58■□□□□ 0.25
LRCH3-201ENST00000334859 CHST2Q9Y4C5 530 aa16.58■□□□□ 0.25
LRCH3-201ENST00000334859 PLD2O14939 933 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 CDRT1O95170 752 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 SNX4O95219 450 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 APOA1P02647 267 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 HOXB2P14652 356 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 GNSP15586 552 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 CPN2P22792 545 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 ACTR1BP42025 376 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 TNFRSF4P43489 277 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 ACTR1AP61163 376 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 EFNB1P98172 346 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 TNFRSF17Q02223 184 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 DEFB134Q4QY38 66 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 C22orf42Q6IC83 251 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 MFSD12Q6NUT3 480 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 TMPRSS11AQ6ZMR5 421 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 UBE2Q1Q7Z7E8 422 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 AKAP14Q86UN6 197 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 OR4N5Q8IXE1 308 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 ANKK1Q8NFD2 765 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 CCL4L1Q8NHW4 92 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 FGF11Q92914 225 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 SLC35A4Q96G79 324 aa16.58■□□□□ 0.24
LRCH3-201ENST00000334859 SCARF2Q96GP6 870 aaPredicted RBP16.58■□□□□ 0.24
LRCH3-201ENST00000334859 CACYBPQ9HB71 228 aaKnown RBP16.58■□□□□ 0.24
LRCH3-201ENST00000334859 CPEP16870 476 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 AZGP1P25311 298 aaKnown RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 NDUFS1P28331 727 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 PRKAR1BP31321 381 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 SYCE2Q6PIF2 218 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 GDPD3Q7L5L3 318 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 LAPTM4BQ86VI4 370 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 NKAIN4Q8IVV8 208 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 GATAD2BQ8WXI9 593 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 TSACCQ96A04 125 aaPredicted RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 PBX4Q9BYU1 374 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 TXNL4BQ9NX01 149 aaKnown RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 ZNF624Q9P2J8 865 aaPredicted RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 YARS2Q9Y2Z4 477 aaKnown RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 MN1Q10571 1320 aaPredicted RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 IRGMA1A4Y4 181 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 DUXAA6NLW8 204 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 SSX4O60224 188 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 COL9A1P20849 921 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 SIM1P81133 766 aaPredicted RBP16.57■□□□□ 0.24
LRCH3-201ENST00000334859 MINDY4Q4G0A6 757 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 RASSF6Q6ZTQ3 369 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 NRMQ8IXM6 262 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 SIMC1Q8NDZ2 872 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 OR10G6Q8NH81 332 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 TXNDC15Q96J42 360 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 C10orf90Q96M02 699 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 MCHR1Q99705 422 aa16.57■□□□□ 0.24
LRCH3-201ENST00000334859 LAMP2P13473 410 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms