RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ZNF407Q9C0G0 2248 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 DIDO1Q9BTC0 2240 aaKnown RBP12.84□□□□□ -0.35
LIMS1-201ENST00000332345 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 TRGV8A0A0C4DH27 118 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 PRSS51A0A1B0GVH4 220 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 RNASET2O00584 256 aaKnown RBP12.84□□□□□ -0.35
LIMS1-201ENST00000332345 ZNF195O14628 629 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 LRRTM2O43300 516 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 DIAPH2O60879 1101 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 ICOSLGO75144 302 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SEMA7AO75326 666 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 KCNH1O95259 989 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 C6orf47O95873 294 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 FREM3P0C091 2139 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 IDO1P14902 403 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 ABOP16442 354 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 PTGS2P35354 604 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 MAGEA5P43359 124 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 MASP1P48740 699 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 PER3P56645 1201 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
LIMS1-201ENST00000332345 GSTA3Q16772 222 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SPDYE7PQ495Y7 208 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SLC9B1Q4ZJI4 515 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 BICRALQ6AI39 1079 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 EPGNQ6UW88 154 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 ACAD11Q709F0 780 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 OR4N2Q8NGD1 307 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 OR56A1Q8NGH5 318 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 GPR151Q8TDV0 419 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SLC9A6Q92581 669 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 HOXB13Q92826 284 aaPredicted RBP12.84□□□□□ -0.35
LIMS1-201ENST00000332345 RELTQ969Z4 430 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 FAM120BQ96EK7 910 aaKnown RBP12.84□□□□□ -0.35
LIMS1-201ENST00000332345 TMEM41AQ96HV5 264 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 NODALQ96S42 347 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 ZBTB18Q99592 522 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 LDAHQ9H6V9 325 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
LIMS1-201ENST00000332345 KLRF1Q9NZS2 232 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 GPR45Q9Y5Y3 372 aa12.84□□□□□ -0.35
LIMS1-201ENST00000332345 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 A0A1B0GTH9 108 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 PRAMEF25A6NGN4 478 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 E9PBE3 544 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 PRRG2O14669 202 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ANKRD28O15084 1053 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 UBDO15205 165 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 SUSD5O60279 629 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 NKX2-2O95096 273 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 KRT16P08779 473 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ALOX5P09917 674 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ALDOCP09972 364 aaKnown RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ELAVL4P26378 380 aaKnown RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 S100A3P33764 101 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 MAP3K8P41279 467 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 CLK3P49761 638 aaKnown RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 NME5P56597 212 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 UFM1P61960 85 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 HBA1P69905 142 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 TIGD3Q6B0B8 471 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 DESI1Q6ICB0 168 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 MFSD12Q6NUT3 480 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 Q6ZPB1 254 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 WDR53Q7Z5U6 358 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 GLB1L3Q8NCI6 653 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 SFXN5Q8TD22 340 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 SSC4DQ8WTU2 575 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 DTNBP1Q96EV8 351 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 GIMAP5Q96F15 307 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 OSBPL11Q9BXB4 747 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 CXorf36Q9H7Y0 433 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ACKR4Q9NPB9 350 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 PLSCR2Q9NRY7 297 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ERRFI1Q9UJM3 462 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 FAF1Q9UNN5 650 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-201ENST00000332345 PCDHGB3Q9Y5G1 929 aa12.83□□□□□ -0.36
LIMS1-201ENST00000332345 ATP8B1O43520 1251 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 HCN1O60741 890 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 SLC22A3O75751 556 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 ZIC2O95409 532 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-201ENST00000332345 IL33O95760 270 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 IGHG3P01860 377 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 RFPL3SP0C7P2 107 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 GDF1P27539 372 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 CA7P43166 264 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 WNT3P56703 355 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 HSF1Q00613 529 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 LRRC74AQ0VAA2 488 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 TP53BP2Q13625 1128 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 C1QL3Q5VWW1 255 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 MTFR2Q6P444 385 aa12.82□□□□□ -0.36
LIMS1-201ENST00000332345 TRILQ7L0X0 811 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms