RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ANXA11P50995 505 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 WNT3P56703 355 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 TAS2R41P59536 307 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 MADCAM1Q13477 382 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 PIN1Q13526 163 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 AKAP14Q86UN6 197 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ANKRD13BQ86YJ7 626 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 OR8J3Q8NGG0 315 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 TBC1D20Q96BZ9 403 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ZG16BQ96DA0 208 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 CPPED1Q9BRF8 314 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ANKRD10Q9NXR5 420 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ATP6V1HQ9UI12 483 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 PCDHGA3Q9Y5H0 932 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 FCMRO60667 390 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 SCELO95171 688 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 CCNYL3P0C7X3 344 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 BMP4P12644 408 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 S100A1P23297 94 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ITGA1P56199 1179 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 DAG1Q14118 895 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 FCRLBQ6BAA4 426 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ZNF425Q6IV72 752 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 DMRTB1Q96MA1 342 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 FNDC11Q9BVV2 318 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ABCG2Q9UNQ0 655 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 EXO1Q9UQ84 846 aaKnown RBP14.86□□□□□ -0.03
PDGFB-201ENST00000331163 M0R129 80 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ASNA1O43681 348 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 SEMA3DO95025 777 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 KCNK5O95279 499 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 SP9P0CG40 484 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 CRISP3P54108 245 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 CD47Q08722 323 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 CLEC12AQ5QGZ9 265 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 XAF1Q6GPH4 301 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 OR7G2Q8NG99 324 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 OR8J2Q8NGG1 315 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 OR1L3Q8NH93 324 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 CCDC74BQ96LY2 380 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ORAI3Q9BRQ5 295 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ZNF304Q9HCX3 659 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ZSCAN32Q9NX65 697 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 P2RX2Q9UBL9 471 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDGFB-201ENST00000331163 FANCMQ8IYD8 2048 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 POLEQ07864 2286 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 A6NCN8 305 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 TNFRSF11BO00300 401 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 MITFO75030 526 aaPredicted RBP14.86□□□□□ -0.03
PDGFB-201ENST00000331163 IFNW1P05000 195 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 PPIBP23284 216 aaKnown RBP14.86□□□□□ -0.03
PDGFB-201ENST00000331163 RAB15P59190 212 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 CHRNEQ04844 493 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 SELENBP1Q13228 472 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 LCN8Q6JVE9 175 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 REEP3Q6NUK4 255 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.86□□□□□ -0.03
PDGFB-201ENST00000331163 PPP1R3BQ86XI6 285 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 VWA5B2Q8N398 1253 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 SLC38A5Q8WUX1 472 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 PYURFQ96I23 114 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 LHX9Q9NQ69 397 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 OCIAD1Q9NX40 245 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 PILRBQ9UKJ0 227 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 MAPRE3Q9UPY8 281 aa14.86□□□□□ -0.03
PDGFB-201ENST00000331163 RNASET2O00584 256 aaKnown RBP14.85□□□□□ -0.03
PDGFB-201ENST00000331163 PCDHGA12O60330 932 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 RAP2AP10114 183 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 CRHBPP24387 322 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 CSF2RBP32927 897 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 ATP6V1E1P36543 226 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 DUSP7Q16829 419 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 C6orf141Q5SZD1 244 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 VRK2Q86Y07 508 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 IL22RA1Q8N6P7 574 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 RHNO1Q9BSD3 238 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 WDR12Q9GZL7 423 aaKnown RBP14.85□□□□□ -0.03
PDGFB-201ENST00000331163 AKIRIN1Q9H9L7 192 aaPredicted RBP14.85□□□□□ -0.03
PDGFB-201ENST00000331163 PCDH15Q96QU1 1955 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 LOC100506127A0A0U1RQW1 187 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 PROM1O43490 865 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 SCO2O43819 266 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 TBX6O95947 436 aaPredicted RBP14.85□□□□□ -0.03
PDGFB-201ENST00000331163 ALOX5P09917 674 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 DRD2P14416 443 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 GGT1P19440 569 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 DGUOKQ16854 277 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 SLC48A1Q6P1K1 146 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 SPRED1Q7Z699 444 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 DOK1Q99704 481 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 CRB3Q9BUF7 120 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 MROQ9BYG7 248 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 AICDAQ9GZX7 198 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 TP63Q9H3D4 680 aaPredicted RBP14.85□□□□□ -0.03
PDGFB-201ENST00000331163 DDX31Q9H8H2 851 aaKnown RBP14.85□□□□□ -0.03
PDGFB-201ENST00000331163 IMPAD1Q9NX62 359 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 ITGB1BP2Q9UKP3 347 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 G3V3Y1 287 aa14.85□□□□□ -0.03
PDGFB-201ENST00000331163 SEC14L2O76054 403 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms