RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ALOXE3Q9BYJ1 711 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 UCK2Q9BZX2 261 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 ZNF350Q9GZX5 532 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 FANCEQ9HB96 536 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 MAN2C1Q9NTJ4 1040 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 SCN3BQ9NY72 215 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 TMEM9Q9P0T7 183 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 ZNF232Q9UNY5 417 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 COMMD3-BMI1R4GMX3 469 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 UNC13CQ8NB66 2214 aa13.92□□□□□ -0.18
TPM3-205ENST00000328159 TMEM150CB9EJG8 249 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 FRS3O43559 492 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 WBP4O75554 376 aaKnown RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 CDC123O75794 336 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 OR2B3O76000 313 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 AK1P00568 194 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 S1PR1P21453 382 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 TTKP33981 857 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 GABRA3P34903 492 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 CRISP1P54107 249 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 UGT2B15P54855 530 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 BTG2P78543 158 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 DUSP8Q13202 625 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 LARS2Q15031 903 aaKnown RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 PROX2Q3B8N5 592 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 SNAP47Q5SQN1 464 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 PGBD2Q6P3X8 592 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 ZNF836Q6ZNA1 936 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 C11orf74Q86VG3 221 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 DEPDC4Q8N2C3 294 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 CLIP4Q8N3C7 705 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 OR51Q1Q8NH59 317 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 APH1BQ8WW43 257 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 GAB3Q8WWW8 586 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 RIT1Q92963 219 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 RBM18Q96H35 190 aaKnown RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 NODALQ96S42 347 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 DGCR6LQ9BY27 220 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 SAP130Q9H0E3 1048 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 ENAMQ9NRM1 1142 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 CUTCQ9NTM9 273 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 NLGN3Q9NZ94 848 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 SEMA5BQ9P283 1151 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 FTSJ1Q9UET6 329 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 SUSD2Q9UGT4 822 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 RSL24D1Q9UHA3 163 aaKnown RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 PILRBQ9UKJ0 227 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 TMEM184BQ9Y519 407 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 SNX5Q9Y5X3 404 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 H3BMH7 237 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 LAMTOR5O43504 91 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 TPST2O60704 377 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 FAM20BO75063 409 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 STX11O75558 287 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 NKX2-2O95096 273 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 KRT20P35900 424 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 HSD17B7P56937 341 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 RGS8P57771 180 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 TAS2R41P59536 307 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 POU6F2P78424 691 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 PTGES3Q15185 160 aaKnown RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 GPR68Q15743 365 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 SMN1Q16637 294 aaKnown RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 XAF1Q6GPH4 301 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 B3GNT6Q6ZMB0 384 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 KANSL1Q7Z3B3 1105 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 GATAD2AQ86YP4 633 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 CLVS1Q8IUQ0 354 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 D2HGDHQ8N465 521 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 LINC00471Q8N535 108 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 HOXB13Q92826 284 aaPredicted RBP13.91□□□□□ -0.18
TPM3-205ENST00000328159 CCDC74AQ96AQ1 378 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 DGAT2Q96PD7 388 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 PRR14Q9BWN1 585 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 DUSP21Q9H596 190 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 CTPS2Q9NRF8 586 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 REV1Q9UBZ9 1251 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 CLDN16Q9Y5I7 305 aa13.91□□□□□ -0.18
TPM3-205ENST00000328159 RP1P56715 2156 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 GXYLT2A0PJZ3 443 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 ZNF749O43361 778 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 DBIP07108 87 aaKnown RBP13.9□□□□□ -0.18
TPM3-205ENST00000328159 THBS1P07996 1170 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 CCNYL3P0C7X3 344 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 OSMP13725 252 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 MAOAP21397 527 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 RPS4Y1P22090 263 aaKnown RBP13.9□□□□□ -0.18
TPM3-205ENST00000328159 CHMP24386 653 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 STT3AP46977 705 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 IDH2P48735 452 aaKnown RBP13.9□□□□□ -0.18
TPM3-205ENST00000328159 SLC35A2P78381 396 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 SIGLEC14Q08ET2 396 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 PLK5Q496M5 336 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 EIPR1Q53HC9 387 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 PRSS42Q7Z5A4 293 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 NLGN4XQ8N0W4 816 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 OR4K5Q8NGD3 323 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms