RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
DNMT3A-202ENST00000321117 SLC28A3Q9HAS3 691 aa12.03□□□□□ -0.48
DNMT3A-202ENST00000321117 MED11Q9P086 117 aa12.03□□□□□ -0.48
DNMT3A-202ENST00000321117 KCNK6Q9Y257 313 aa12.03□□□□□ -0.48
DNMT3A-202ENST00000321117 BRWD3Q6RI45 1802 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 UNC119BA6NIH7 251 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 SLC22A31A6NKX4 558 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 OR7A10O76100 309 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 C6P13671 934 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 MMP11P24347 488 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 EFR3AQ14156 821 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 LAIR1Q6GTX8 287 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 OR2A12Q8NGT7 310 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 A4GALTQ9NPC4 353 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 TAS2R10Q9NYW0 307 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 FBXO10Q9UK96 956 aa12.02□□□□□ -0.48
DNMT3A-202ENST00000321117 C1orf226A1L170 272 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 FAM183AA6NL82 134 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 SMLR1H3BR10 107 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 ICMTO60725 284 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 ADH5P11766 374 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 RAB3BP20337 219 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 MNDAP41218 407 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 CTBP2P56545 445 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 BIKQ13323 160 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 GPR50Q13585 617 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 SSX1Q16384 188 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 LRRC28Q86X40 367 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 KIF18BQ86Y91 864 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 FAM26EQ8N5C1 309 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 FBLIM1Q8WUP2 373 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 FBXL12Q9NXK8 326 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 HCN3Q9P1Z3 774 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 RASD1Q9Y272 281 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 TMEM5Q9Y2B1 443 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 COLEC10Q9Y6Z7 277 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 CD22P20273 847 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 HLA-DMAP28067 261 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 CST5P28325 142 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 HOXC5Q00444 222 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 BCL2A1Q16548 175 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF613Q6PF04 617 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 FAM83HQ6ZRV2 1179 aaPredicted RBP12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 DPPA4Q7L190 304 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 PELI2Q9HAT8 420 aa12.02□□□□□ -0.49
DNMT3A-202ENST00000321117 C1QBP02746 253 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 HIST1H2ABP04908 130 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 DDX6P26196 483 aaKnown RBP eCLIP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 CREB3L2Q70SY1 520 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 HIST3H2AQ7L7L0 130 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 FTMTQ8N4E7 242 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 FBXO15Q8NCQ5 510 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ZFAND1Q8TCF1 268 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 HIST1H2ACQ93077 130 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 MED30Q96HR3 178 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 MCCC1Q96RQ3 725 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 EDDM13A0A1B0GTR0 161 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 TRDV1A0A1B0GX56 115 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ANXA2P2A6NMY6 339 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 RGS13O14921 159 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 FABP7O15540 132 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ITGA10O75578 1167 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 CD160O95971 181 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ANXA2P07355 339 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ACADLP28330 430 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 TSPAN31Q12999 210 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 NOGQ13253 232 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 SNTA1Q13424 505 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 IL20RBQ6UXL0 311 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 B3GLCTQ6Y288 498 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 MS4A15Q8N5U1 240 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ACOT11Q8WXI4 607 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC41A3Q96GZ6 507 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 KATNB1Q9BVA0 655 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 LINC00597Q9H2U6 94 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 TMEM184CQ9NVA4 438 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 GNG8Q9UK08 70 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 B3GALT2O43825 422 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ASGR2P07307 311 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 NUP62P37198 522 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 GZMKP49863 264 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 PSMA6P60900 246 aaKnown RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC7A9P82251 487 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 PON3Q15166 354 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 TMEM35AQ53FP2 167 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■■■■□ 24.8
DNMT3A-202ENST00000321117 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 ACSS1Q9NUB1 689 aaPredicted RBP12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 TAAR2Q9P1P5 351 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 FTSJ1Q9UET6 329 aa12.01□□□□□ -0.49
DNMT3A-202ENST00000321117 FXYD6-FXYD2A0A087WZ82 144 aa12□□□□□ -0.49
DNMT3A-202ENST00000321117 TMEM129A0AVI4 362 aa12□□□□□ -0.49
DNMT3A-202ENST00000321117 ARRDC5A6NEK1 342 aa12□□□□□ -0.49
DNMT3A-202ENST00000321117 GAPDHSO14556 408 aaPredicted RBP12□□□□□ -0.49
DNMT3A-202ENST00000321117 CD3GP09693 182 aa12□□□□□ -0.49
DNMT3A-202ENST00000321117 PRKACBP22694 351 aa12□□□□□ -0.49
DNMT3A-202ENST00000321117 FBXW4P57775 412 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms