RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 EML2O95834 649 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 KRT8P05787 483 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 F3P13726 295 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 RPE65Q16518 533 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 NDUFA9Q16795 377 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 KLHL22Q53GT1 634 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 GDPGP1Q6ZNW5 385 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 PLEKHM3Q6ZWE6 761 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 OR56A1Q8NGH5 318 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 TMEM163Q8TC26 289 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 LCN9Q8WX39 176 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 CCDC32Q9BV29 185 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 TMED9Q9BVK6 235 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 SLC17A9Q9BYT1 436 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 COMMD3Q9UBI1 195 aa16.33■□□□□ 0.2
COL9A1-201ENST00000320755 FABP12A6NFH5 140 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 GUCY1B2O75343 617 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SLC2A10O95528 541 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 CSF2P04141 144 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 MSL3P1P0C860 447 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ACADMP11310 421 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 GNA13Q14344 377 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 INSL4Q14641 139 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ENTPD8Q5MY95 495 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 CCNJQ5T5M9 372 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 NRMQ8IXM6 262 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 TMEFF1Q8IYR6 380 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SHISA5Q8N114 240 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ART5Q96L15 291 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 DMRTB1Q96MA1 342 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SLC38A2Q96QD8 506 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 HDHD5Q9BXW7 423 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 CSNK1G3Q9Y6M4 447 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 PRODHO43272 600 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 PIP5K1CO60331 668 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 IL7P13232 177 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SLC36A4Q6YBV0 504 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 BBS1Q8NFJ9 593 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SLC25A46Q96AG3 418 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 KCTD7Q96MP8 289 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 FGF22Q9HCT0 170 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 CHST2Q9Y4C5 530 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 PCDHGA4Q9Y5G9 962 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF860A6NHJ4 632 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 FAM183AA6NL82 134 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 PROM1O43490 865 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 DNAJB6O75190 326 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 UBXN7O94888 489 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ACP2P11117 423 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ENDOUP21128 410 aaKnown RBP16.32■□□□□ 0.2
COL9A1-201ENST00000320755 GSTM3P21266 225 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 GDI1P31150 447 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 CDH11P55287 796 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SIM1P81133 766 aaPredicted RBP16.32■□□□□ 0.2
COL9A1-201ENST00000320755 TRAM2Q15035 370 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF791Q3KP31 576 aaPredicted RBP16.32■□□□□ 0.2
COL9A1-201ENST00000320755 AGAP6Q5VW22 663 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 MRM1Q6IN84 353 aaKnown RBP16.32■□□□□ 0.2
COL9A1-201ENST00000320755 FAM111BQ6SJ93 734 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 OR52P1PQ8NH57 321 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 TMCO6Q96DC7 493 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 SLC35A4Q96G79 324 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 AGAP4Q96P64 663 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 MCHR1Q99705 422 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 RPP25Q9BUL9 199 aaKnown RBP16.32■□□□□ 0.2
COL9A1-201ENST00000320755 RSPH9Q9H1X1 276 aaPredicted RBP16.32■□□□□ 0.2
COL9A1-201ENST00000320755 CES1P1Q9UKY3 287 aa16.32■□□□□ 0.2
COL9A1-201ENST00000320755 NCR1O76036 304 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 ZIC2O95409 532 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-201ENST00000320755 APODP05090 189 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF888P0CJ79 500 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CMPK1P30085 196 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 PYDC2Q56P42 97 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 SCAIQ8N9R8 606 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 GNPDA2Q8TDQ7 276 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 TMEM255BQ8WV15 326 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CDS1Q92903 461 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CAPN10Q9HC96 672 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 NEK6Q9HC98 313 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 SLC30A4O14863 429 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CASC3O15234 703 aaKnown RBP16.31■□□□□ 0.2
COL9A1-201ENST00000320755 LALBAP00709 142 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CPEP16870 476 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CELP19835 753 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 C5AR1P21730 350 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 FCARP24071 287 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 IGFALSP35858 605 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 RFX2P48378 723 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 ST3GAL3Q11203 375 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 GPR68Q15743 365 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 DEFB134Q4QY38 66 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 PDZK1Q5T2W1 519 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CD300LDQ6UXZ3 194 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 TMEM64Q6YI46 380 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 HSDL2Q6YN16 418 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 GALNT12Q8IXK2 581 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 CCL4L1Q8NHW4 92 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 PIGXQ8TBF5 258 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 HOXD1Q9GZZ0 328 aa16.31■□□□□ 0.2
COL9A1-201ENST00000320755 MIXL1Q9H2W2 232 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms