RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 VITQ6UXI7 678 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 THAP10Q9P2Z0 257 aaPredicted RBP23.75■■□□□ 1.39
HOXB3-201ENST00000311626 CSNK1G3Q9Y6M4 447 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 A0A0G2JPF8 293 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 IQCMA0A1B0GVH7 501 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 HNRNPCL2B2RXH8 293 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 HNRNPCL3B7ZW38 293 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 DNAJB6O75190 326 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 THY1P04216 161 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 HNRNPCL4P0DMR1 293 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 ACADMP11310 421 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 FUT1P19526 365 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 CSNK2A2P19784 350 aaPredicted RBP23.75■■□□□ 1.39
HOXB3-201ENST00000311626 TRIM23P36406 574 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 TRA2BP62995 288 aaKnown RBP23.75■■□□□ 1.39
HOXB3-201ENST00000311626 TGM3Q08188 693 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 C2orf27AQ580R0 203 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 OR2L3Q8NG85 312 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 RAB7BQ96AH8 199 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 CES1P1Q9UKY3 287 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 PCDHGB2Q9Y5G2 931 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 STON1Q9Y6Q2 735 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 FAM183AA6NL82 134 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 ISM1B1AKI9 464 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 KAT7O95251 611 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 CCNYL3P0C7X3 344 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 F3P13726 295 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 APEX1P27695 318 aaKnown RBP23.74■■□□□ 1.39
HOXB3-201ENST00000311626 GJA4P35212 333 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 NDUFA9Q16795 377 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 PLK5Q496M5 336 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 C3orf38Q5JPI3 329 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 C16orf62Q7Z3J2 963 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 GNPDA2Q8TDQ7 276 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 TMEM255BQ8WV15 326 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 ELP4Q96EB1 424 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 ZC3H12DA2A288 527 aaKnown RBP23.74■■□□□ 1.39
HOXB3-201ENST00000311626 MEIOCA2RUB1 952 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 IL1AP01583 271 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 RACK1P63244 317 aaKnown RBP23.74■■□□□ 1.39
HOXB3-201ENST00000311626 PDGFRLQ15198 375 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 PDZK1Q5T2W1 519 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 MRM1Q6IN84 353 aaKnown RBP23.74■■□□□ 1.39
HOXB3-201ENST00000311626 FAM111BQ6SJ93 734 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 NRMQ8IXM6 262 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 SLC16A11Q8NCK7 471 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 OR4E2Q8NGC2 313 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 ART5Q96L15 291 aa23.74■■□□□ 1.39
HOXB3-201ENST00000311626 CENPVL1A0A0U1RR11 272 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 GRXCR1A8MXD5 290 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 IDH3BO43837 385 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 CEACAM5P06731 702 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 ASGR2P07307 311 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 CDH11P55287 796 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 BNC1Q01954 994 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 RNLSQ5VYX0 342 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 SLC48A1Q6P1K1 146 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 TRIM48Q8IWZ4 208 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 OR2L8Q8NGY9 312 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 SLC35A4Q96G79 324 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 WDFY2Q96P53 400 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 TTYH2Q9BSA4 534 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 C2orf92A0A1B0GVN3 265 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 SHISA3A0PJX4 238 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 OMPP47874 163 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 SLC9A3P48764 834 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 TBRG1Q3YBR2 411 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 TMEM35AQ53FP2 167 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 TMEM240Q5SV17 173 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 ATP6V1C2Q8NEY4 427 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 OR2L5Q8NG80 312 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 DIO2Q92813 273 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 UFD1Q92890 307 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 ST6GAL2Q96JF0 529 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 CLCA2Q9UQC9 943 aa23.73■■□□□ 1.39
HOXB3-201ENST00000311626 SLC30A4O14863 429 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CASKO14936 926 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 EMC8O43402 210 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 EML2O95834 649 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 ID2Q02363 134 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 RAB40BQ12829 278 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CCDC92Q53HC0 331 aaPredicted RBP23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CCNJQ5T5M9 372 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 PLA2G2FQ9BZM2 168 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 GIMAP4Q9NUV9 329 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 SYNDIG1LA6NDD5 238 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CD8B2A6NJW9 211 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CACNB4O00305 520 aaPredicted RBP23.72■■□□□ 1.39
HOXB3-201ENST00000311626 SOCS6O14544 535 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CD8BP10966 210 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 CELP19835 753 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 GSTM3P21266 225 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 SCN1BQ07699 218 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 TSPAN31Q12999 210 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 TRAM2Q15035 370 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 SLC25A30Q5SVS4 291 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 PLEKHM3Q6ZWE6 761 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 DTX3Q8N9I9 347 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 OR56A1Q8NGH5 318 aa23.72■■□□□ 1.39
HOXB3-201ENST00000311626 SP7Q8TDD2 431 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms