RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 RNF151Q2KHN1 245 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ESCO2Q56NI9 601 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CFAP161Q6P656 301 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CEACAM20Q6UY09 585 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 RFLNAQ6ZTI6 216 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 VRK3Q8IV63 474 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 OR7A2PQ8NGA2 310 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 OR4K1Q8NGD4 311 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 OR9I1Q8NGQ6 314 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 HSPA12BQ96MM6 686 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SMIM14Q96QK8 99 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 EPYCQ99645 322 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ANKRD19PQ9H560 264 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 RANBP3Q9H6Z4 567 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 MTHFD2LQ9H903 347 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 FGF22Q9HCT0 170 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 A4GALTQ9NPC4 353 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ZFR2Q9UPR6 939 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 MAP4K5Q9Y4K4 846 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ALG5Q9Y673 324 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 NUP210Q8TEM1 1887 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 NUP205Q92621 2012 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 A8MV72 311 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 H0YIG0 161 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 DENRO43583 198 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CSF2P04141 144 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CFIP05156 583 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 BMP7P18075 431 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 MAOBP27338 520 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ITGA1P56199 1179 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TIAL1Q01085 375 aaKnown RBP eCLIP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CCNIQ14094 377 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 RGNQ15493 299 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CYBRD1Q53TN4 286 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 FGD3Q5JSP0 725 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 C6orf132Q5T0Z8 1188 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CYB5R2Q6BCY4 276 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 RAB12Q6IQ22 244 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SLCO6A1Q86UG4 719 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PDSS2Q86YH6 399 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 MCATQ8IVS2 390 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CCDC36Q8IYA8 594 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ACOT4Q8N9L9 421 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 XAGE5Q8WWM1 108 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 C3orf30Q96M34 536 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 F2RL3Q96RI0 385 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CDX2Q99626 313 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PINK1Q9BXM7 581 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CHRNA10Q9GZZ6 450 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 GHITMQ9H3K2 345 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 DCAF13Q9NV06 445 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CD300AQ9UGN4 299 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PLAGL1Q9UM63 463 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SLC6A14Q9UN76 642 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SPIN1Q9Y657 262 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TET1Q8NFU7 2136 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 FAM86C2PA6NEL3 165 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 WWP2O00308 870 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SYT5O00445 386 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TXNL1O43396 289 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 GADD45GO95257 159 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 HIST1H2ABP04908 130 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PRKAR1AP10644 381 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 MAPK3P27361 379 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 GTF2E2P29084 291 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 OMPP47874 163 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 XKP51811 444 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 PRKAG1P54619 331 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 AQP4P55087 323 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 RAB2AP61019 212 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SIGLEC14Q08ET2 396 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SEC23BQ15437 767 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 HIST3H2AQ7L7L0 130 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CMIPQ8IY22 773 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 SPAG16Q8N0X2 631 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 OR13H1Q8NG92 308 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 OR5J2Q8NH18 312 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 BAHD1Q8TBE0 780 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 ZCCHC10Q8TBK6 192 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TBC1D15Q8TC07 691 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 MAGEE2Q8TD90 523 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 HIST1H2ACQ93077 130 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TP53INP1Q96A56 240 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 NEURL3Q96EH8 262 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 BMFQ96LC9 184 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 LRRC3BQ96PB8 259 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 IL17FQ96PD4 163 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TRIM2Q9C040 744 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 RAB33BQ9H082 229 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 NUAK2Q9H093 628 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 QRSL1Q9H0R6 528 aaKnown RBP5.66□□□□□ -1.5
SEC22A-201ENST00000309934 KCNN2Q9H2S1 579 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 TUBB1Q9H4B7 451 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 FZD3Q9NPG1 666 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 NLGN3Q9NZ94 848 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 DOCK4Q8N1I0 1966 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 CACNA1GO43497 2377 aa5.66□□□□□ -1.5
SEC22A-201ENST00000309934 A0A1W2PPW3 197 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms