RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 KEAP1Q14145 624 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 EXOSC7Q15024 291 aaKnown RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 NR0B2Q15466 257 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 ARHGAP11BQ3KRB8 267 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PEAR1Q5VY43 1037 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 KMT5CQ86Y97 462 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 RBM45Q8IUH3 476 aaKnown RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 OR4C6Q8NH72 309 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 SLC41A2Q96JW4 573 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 WFDC6Q9BQY6 131 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-202ENST00000297979 CUTCQ9NTM9 273 aa13.31□□□□□ -0.28
C9orf3-202ENST00000297979 USP34Q70CQ2 3546 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 PCDH17O14917 1159 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 SEMA7AO75326 666 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-202ENST00000297979 CFIP05156 583 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 PNLIPP16233 465 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 ELK4P28324 431 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 NR1H2P55055 460 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 CDH15P55291 814 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 TUBA4AP68366 448 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 IGLV3-21P80748 117 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 FOXB2Q5VYV0 432 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 DGAT2L6Q6ZPD8 337 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 SETD9Q8NE22 299 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 STACQ99469 402 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 GABARAPL3Q9BY60 117 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 FKBP14Q9NWM8 211 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 RHBDL2Q9NX52 303 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 TECTAO75443 2155 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 A0A087WXM4 84 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 ARRDC5A6NEK1 342 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 TGFBR3LH3BV60 316 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 SYT5O00445 386 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 YKT6O15498 198 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 EPPINO95925 133 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 RYKP34925 604 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 CLK3P49761 638 aaKnown RBP13.3□□□□□ -0.28
C9orf3-202ENST00000297979 MAP4K2Q12851 820 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 SATL1Q86VE3 508 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 NMNAT1Q9HAN9 279 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-202ENST00000297979 INIPQ9NRY2 104 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 POFUT2Q9Y2G5 429 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 HCN4Q9Y3Q4 1203 aa13.3□□□□□ -0.28
C9orf3-202ENST00000297979 TMEM184BQ9Y519 407 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-202ENST00000297979 SPTBP11277 2137 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 PI4KAP42356 2102 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ARPC4-TTLL3A0A0A6YYG9 625 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 A8MU76 341 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 FCMRO60667 390 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 H1F0P07305 194 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 CD47Q08722 323 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 NPRL3Q12980 569 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 RAPSNQ13702 412 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ERV3-1Q14264 604 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 OR9Q2Q8NGE9 314 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ZC3H10Q96K80 434 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 NUDT22Q9BRQ3 303 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ALOXE3Q9BYJ1 711 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 SLC13A4Q9UKG4 626 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 SATB2Q9UPW6 733 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 WDR45Q9Y484 360 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 GMPPBQ9Y5P6 360 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 SNX5Q9Y5X3 404 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ARID1BQ8NFD5 2236 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 NINQ8N4C6 2090 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF749O43361 778 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 CBX7O95931 251 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 SMIM11AP58511 58 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ISL1P61371 349 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 TYW3Q6IPR3 259 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 TTLL10Q6ZVT0 673 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 VRK2Q86Y07 508 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 OR52R1Q8NGF1 315 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 OR1L3Q8NH93 324 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 HDAC2Q92769 488 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 RIT1Q92963 219 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ZG16BQ96DA0 208 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 MVB12AQ96EY5 273 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 RBM18Q96H35 190 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF768Q9H5H4 540 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 GAREM1Q9H706 876 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 ZNF556Q9HAH1 456 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 CACYBPQ9HB71 228 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 MKLN1Q9UL63 735 aa13.29□□□□□ -0.28
C9orf3-202ENST00000297979 NDRG4Q9ULP0 352 aaKnown RBP13.29□□□□□ -0.28
C9orf3-202ENST00000297979 MAU2Q9Y6X3 613 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms