RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 CNIH2Q6PI25 160 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 TBC1D15Q8TC07 691 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 DEDD2Q8WXF8 326 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 HLA-CQ95604 372 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 CHFRQ96EP1 664 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 TMEM41AQ96HV5 264 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 CNN2Q99439 309 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 PCDHGB2Q9Y5G2 931 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 C11orf98E9PRG8 122 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SOX30O94993 753 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SCGB1D2O95969 90 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 POLR2IP36954 125 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 RAB28P51157 221 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 PELI3Q8N2H9 469 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 TMIEQ8NEW7 156 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 OR2T11Q8NH01 316 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 WDR20Q8TBZ3 569 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 PDLIM5Q96HC4 596 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 G6PC3Q9BUM1 346 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 CITO14578 2027 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 PPM1BO75688 479 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 CDKN2CP42773 168 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 TBCEQ15813 527 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SLC14A2Q15849 920 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 FAM86B1Q8N7N1 296 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SYT14Q8NB59 555 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SLC41A3Q96GZ6 507 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 ZNF583Q96ND8 569 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SLC46A2Q9BY10 475 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 A0A1B0GVI7 797 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 LRRTM2O43300 516 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 ITGA5P08648 1049 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 ELOAQ14241 798 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 GRM7Q14831 915 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 LPAL2Q16609 132 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 UBE2UQ5VVX9 321 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SFRP4Q6FHJ7 346 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SLC7A5P1Q8MH63 180 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 RPL3LQ92901 407 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 NT5C3BQ969T7 300 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SGTBQ96EQ0 304 aa15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SRA1Q9HD15 236 aaKnown RBP15.2■□□□□ 0.02
ARHGEF28-201ENST00000296794 SOCS7O14512 581 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 CFL1P23528 166 aaKnown RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 SSTR4P31391 388 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 GPR143P51810 404 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 FXYD6P3P58550 94 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ANKRD54Q6NXT1 300 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 OR13F1Q8NGS4 319 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 TMEM234Q8WY98 164 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 MTG2Q9H4K7 406 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ALS2Q96Q42 1657 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ENDOUP21128 410 aaKnown RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 S1PR1P21453 382 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 LHCGRP22888 699 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 MAGEA12P43365 314 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 SIM1P81133 766 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 CPXM2Q8N436 756 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 RNF175Q8N4F7 328 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 OR6C4Q8NGE1 309 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 OR5AR1Q8NGP9 310 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 RHOXF1Q8NHV9 184 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 SAMD8Q96LT4 415 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ZIC5Q96T25 663 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 AP1G1O43747 822 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 COL9A2Q14055 689 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 HTR3DQ70Z44 454 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 FUNDC1Q8IVP5 155 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 OR52E2Q8NGJ4 325 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 GGHQ92820 318 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 CPPED1Q9BRF8 314 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 SORBS1Q9BX66 1292 aaKnown RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ARL6Q9H0F7 186 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ATG5Q9H1Y0 275 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 MGAT4AQ9UM21 535 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 NARSO43776 548 aaKnown RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 FMO6PO60774 539 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 SDC3O75056 442 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 DDCP20711 480 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 FAM76BQ5HYJ3 339 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 LRRN1Q6UXK5 716 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 PGBD5Q8N414 524 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 PARP16Q8N5Y8 322 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 SLC39A13Q96H72 371 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 RBP7Q96R05 134 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 PCDH10Q9P2E7 1040 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 ANKMY1Q9P2S6 941 aa15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 FBXO9Q9UK97 447 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-201ENST00000296794 PRAMEF26H0Y7S4 382 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 CREBL2O60519 120 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 CSTBP04080 98 aaKnown RBP15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 HOXD12P35452 270 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 TUBB3Q13509 450 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 CPOQ8IVL8 374 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 OR2L2Q8NH16 312 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 ZNF350Q9GZX5 532 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 CD300AQ9UGN4 299 aa15.18■□□□□ 0.02
ARHGEF28-201ENST00000296794 ZNF208O43345 1280 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms