RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CTXN1P60606 82 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 EEF1A2Q05639 463 aaKnown RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 ECH1Q13011 328 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 BCL7AQ4VC05 210 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 LRFN4Q6PJG9 635 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR14A16Q8NHC5 309 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 RPH3AQ9Y2J0 694 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 CASC3O15234 703 aaKnown RBP16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 RIDAP52758 137 aaKnown RBP16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 ARPC4P59998 168 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 SEC23BQ15437 767 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 TRAM1Q15629 374 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 SPEM1Q8N4L4 309 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 SFXN5Q8TD22 340 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 CCDC107Q8WV48 283 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR6C1Q96RD1 312 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 FKBP14Q9NWM8 211 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 PCDHA9Q9Y5H5 950 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 RLN2P04090 185 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 FESP07332 822 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 PEPDP12955 493 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 INHBCP55103 352 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 RAB38P57729 211 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 TUBA3CQ13748 450 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 VEZF1Q14119 521 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 GPR18Q14330 331 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZBED5Q49AG3 693 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR51Q1Q8NH59 317 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 INPP5KQ9BT40 448 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 PINK1Q9BXM7 581 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 TTTY10Q9BZA0 68 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 BOKQ9UMX3 212 aaPredicted RBP16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 AKAP11Q9UKA4 1901 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 DHRS4L1P0CG22 281 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 PRPS1P60891 318 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 C14orf28Q4W4Y0 310 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 NRMQ8IXM6 262 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR5B2Q96R09 309 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 TMEM165Q9HC07 324 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF432O94892 652 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 GPLD1P80108 840 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLITRK4Q8IW52 837 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF565Q8N9K5 539 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 IL17RCQ8NAC3 791 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 FBXL20Q96IG2 436 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 ADOQ96SZ5 270 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC6A16Q9GZN6 736 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 PADI1Q9ULC6 663 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 VDAC3Q9Y277 283 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 MYO7AQ13402 2215 aa16.71■□□□□ 0.27
CDC42EP3-201ENST00000295324 C7P10643 843 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 IRF2P14316 349 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 GDF1P27539 372 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 HTR3AP46098 478 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 SOX2P48431 317 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 EPHA4P54764 986 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 CSNK2A1P68400 391 aaPredicted RBP16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 PLEKHA6Q9Y2H5 1048 aa16.71■□□□□ 0.26
CDC42EP3-201ENST00000295324 H3BML4 177 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 E2F3O00716 465 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 CAPN3P20807 821 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 DCKP27707 260 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TMEM201Q5SNT2 666 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 AFMIDQ63HM1 303 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 PROKR1Q8TCW9 393 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ADAMTS19Q8TE59 1207 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 EVA1AQ9H8M9 152 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDH20Q9HBT6 801 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TMPRSS11EQ9UL52 423 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 NDUFB2O95178 105 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 IMPA1P29218 277 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ETV4P43268 484 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ACTA2P62736 377 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ACTG2P63267 376 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ST3GAL4Q11206 333 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 DCST2Q5T1A1 773 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 LCN8Q6JVE9 175 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 FER1L6-AS2Q96M78 137 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 DHRS4Q9BTZ2 278 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 SEMA6CQ9H3T2 930 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 C6orf106Q9H6K1 298 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 C2orf42Q9NWW7 574 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 H3BUI4 141 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 SULT2B1O00204 365 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TCN2P20062 427 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 GNG2P59768 71 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TUBA1BP68363 451 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TUBA4AP68366 448 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 GTDC1Q4AE62 458 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TUBA1AQ71U36 451 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR52E2Q8NGJ4 325 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 HDAC2Q92769 488 aaKnown RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 S100A16Q96FQ6 103 aaKnown RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 A0A1B0GUL6 1792 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 AP1G1O43747 822 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDRT1O95170 752 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 CELP19835 753 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms