RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 GZMKP49863 264 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 MLIPQ5VWP3 458 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 SFRP4Q6FHJ7 346 aaPredicted RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 LINGO2Q7L985 606 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 TBC1D19Q8N5T2 526 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 MAP6Q96JE9 813 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 MCHR1Q99705 422 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 BPTFQ12830 3046 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 KHDRBS3O75525 346 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 SEMG1P04279 462 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 SYPP08247 313 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 DDCP20711 480 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 DNASE1P24855 282 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 CCR8P51685 355 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 NDUFA9Q16795 377 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 KHDRBS2Q5VWX1 349 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 ARMC6Q6NXE6 501 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 GAREM2Q75VX8 874 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 OR8K5Q8NH50 307 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 NUS1Q96E22 293 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 ALG14Q96F25 216 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 CACNG6Q9BXT2 260 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 CDV3Q9UKY7 258 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 DIMT1Q9UNQ2 313 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 TEX13CA0A0J9YWL9 993 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 PPM1DO15297 605 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 MID1O15344 667 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 STX11O75558 287 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 HMGN2P05204 90 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 GABRB1P18505 474 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 MAPK9P45984 424 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 SNRPGP62308 76 aaKnown RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 GNA13Q14344 377 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 ZNF767PQ75MW2 155 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 FGD2Q7Z6J4 655 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 CYB561A3Q8NBI2 242 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 GPR32P1Q8NGA4 272 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 C16orf58Q96GQ5 468 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 KRCC1Q9NPI7 259 aaPredicted RBP12.62□□□□□ -0.39
SCAF4-201ENST00000286835 SPHK2Q9NRA0 654 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 GTF2A1LQ9UNN4 478 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 RASD1Q9Y272 281 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 TRAPPC4Q9Y296 219 aa12.62□□□□□ -0.39
SCAF4-201ENST00000286835 ZC3H12DA2A288 527 aaKnown RBP12.61□□□□□ -0.39
SCAF4-201ENST00000286835 A8MUA0 341 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 PLA2G10O15496 165 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SCO2O43819 266 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ANXA3P12429 323 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SLC1A3P43003 542 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ST3GAL3Q11203 375 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SLC9A5Q14940 896 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
SCAF4-201ENST00000286835 Q5BKY6 102 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 NDUFAF5Q5TEU4 345 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 OR56A3Q8NH54 315 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 OR51A7Q8NH64 312 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ZNF689Q96CS4 500 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SAMD8Q96LT4 415 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 DPH7Q9BTV6 452 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SLC7A5P2Q9GIP4 190 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ZNF780BQ9Y6R6 833 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SPTBP11277 2137 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 K7ESM1 405 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 NUPL2O15504 423 aaKnown RBP12.61□□□□□ -0.39
SCAF4-201ENST00000286835 NDUFS4O43181 175 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ACP2P11117 423 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ACP5P13686 325 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 TIMP2P16035 220 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 GIFP27352 417 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 PYCR1P32322 319 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ARL4DP49703 201 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 CAMK1Q14012 370 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 TRAM2Q15035 370 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 C10orf53Q8N6V4 93 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 OR51L1Q8NGJ5 315 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ADAP2Q9NPF8 381 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 NTNG1Q9Y2I2 539 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ARID1AO14497 2285 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ANKRD36A6QL64 1941 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ALPK2Q86TB3 2170 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-201ENST00000286835 ID2Q02363 134 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 PDGFRLQ15198 375 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 FAM27D1Q5T7N8 215 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 RELTQ969Z4 430 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 SIGLEC11Q96RL6 698 aa12.61□□□□□ -0.39
SCAF4-201ENST00000286835 PLEKHB1Q9UF11 243 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms