RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CD300LDQ6UXZ3 194 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ZER1Q7Z7L7 766 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF595Q8IYB9 648 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 SLC25A45Q8N413 288 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 MORN4Q8NDC4 146 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 OR6C4Q8NGE1 309 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 GGHQ92820 318 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ZDHHC12Q96GR4 267 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 PEX11GQ96HA9 241 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 COG8Q96MW5 612 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 SIGLEC11Q96RL6 698 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CD180Q99467 661 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 SPRTNQ9H040 489 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ERVMER34-1Q9H9K5 563 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CTPS2Q9NRF8 586 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 IMPAD1Q9NX62 359 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 HCN3Q9P1Z3 774 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 SATB2Q9UPW6 733 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF443Q9Y2A4 671 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CSNK1G3Q9Y6M4 447 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 NINQ8N4C6 2090 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CEP192Q8TEP8 1941 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ABCA7Q8IZY2 2146 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 KNL1Q8NG31 2342 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 A0A087WUU8 490 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 BLACEA4D250 179 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AGAP5A6NIR3 686 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 OR10H2O60403 315 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MPZL2O60487 215 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 STX11O75558 287 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SOX30O94993 753 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 CBX7O95931 251 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 TP53P04637 393 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 IGFBP1P08833 259 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 CCNYL3P0C7X3 344 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MMP11P24347 488 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MASP1P48740 699 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 OR1D5P58170 312 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 TAS2R41P59536 307 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 IGLV3-21P80748 117 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ALDH6A1Q02252 535 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SLC13A2Q13183 592 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ERV3-1Q14264 604 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 LARS2Q15031 903 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 TRAM2Q15035 370 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 GPR68Q15743 365 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 DCST2Q5T1A1 773 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 CCNJQ5T5M9 372 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SLX4IPQ5VYV7 408 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AP1ARQ63HQ0 302 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 C1orf94Q6P1W5 598 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AHSA2Q719I0 299 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF619Q8N2I2 560 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SVOPQ8N4V2 548 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 OR4K5Q8NGD3 323 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 GPR151Q8TDV0 419 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 PIK3R3Q92569 461 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 RORBQ92753 470 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 DIO2Q92813 273 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 HOXB13Q92826 284 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MYDGFQ969H8 173 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SLC38A4Q969I6 547 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 FKBP10Q96AY3 582 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ALOXE3Q9BYJ1 711 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF350Q9GZX5 532 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 CACYBPQ9HB71 228 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 PRTFDC1Q9NRG1 225 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SEMA4GQ9NTN9 838 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 FKBP14Q9NWM8 211 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 FBXO34Q9NWN3 711 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SOHLH2Q9NX45 425 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SLC6A14Q9UN76 642 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MRPS33Q9Y291 106 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 IGHV1OR21-1A0A087WYE8 117 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 GXYLT2A0PJZ3 443 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 FITM1A5D6W6 292 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 CLCA1A8K7I4 914 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 TGFBR3LH3BV60 316 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 CLDN4O14493 209 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AP3D1O14617 1153 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 NKX2-2O95096 273 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AK1P00568 194 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 THBS1P07996 1170 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 GIMD1P0DJR0 217 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 GABRA3P34903 492 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 TRHRP34981 398 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 AVPR1BP47901 424 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 RGS8P57771 180 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 EEF1A1P68104 462 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 POU6F2P78424 691 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 BTG2P78543 158 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 LSM11P83369 360 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MAT1AQ00266 395 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ST3GAL3Q11203 375 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SRSF5Q13243 272 aaKnown RBP8.93□□□□□ -0.98
TRIM55-201ENST00000276573 MAPK14Q16539 360 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SYT16Q17RD7 645 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 ENTPD8Q5MY95 495 aa8.93□□□□□ -0.98
TRIM55-201ENST00000276573 SYT6Q5T7P8 510 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms