RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 BTBD9Q96Q07 612 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 LRRC1Q9BTT6 524 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 SFXN3Q9BWM7 321 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 CDC42EP4Q9H3Q1 356 aaKnown RBP8.1□□□□□ -1.11
TPM3-201ENST00000271850 KLRF1Q9NZS2 232 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 BCAP29Q9UHQ4 241 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 ROS1P08922 2347 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 SVEP1Q4LDE5 3571 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 OR6C70A6NIJ9 312 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 ESPNB1AK53 854 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 ACOX3O15254 700 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 CBR3O75828 277 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 OR4F21O95013 312 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 CGAP01215 116 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 IL3P08700 152 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 CYP4B1P13584 511 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 CSNK2A2P19784 350 aaPredicted RBP8.09□□□□□ -1.11
TPM3-201ENST00000271850 DRD5P21918 477 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 TCEA1P23193 301 aaKnown RBP8.09□□□□□ -1.11
TPM3-201ENST00000271850 SRD5A2P31213 254 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 SUCLG1P53597 346 aaKnown RBP8.09□□□□□ -1.11
TPM3-201ENST00000271850 FAM27E3Q08E93 113 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 POU4F2Q12837 409 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 KEAP1Q14145 624 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 GUSBP1Q15486 140 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 UNC50Q53HI1 259 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 MILR1Q7Z6M3 343 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 PRIMA1Q86XR5 153 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 PLCZ1Q86YW0 608 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 RELL1Q8IUW5 271 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 FADS6Q8N9I5 356 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 OR7G2Q8NG99 324 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 OR14L1PQ8NHC6 308 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 PPP1R14CQ8TAE6 165 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 SELENOMQ8WWX9 145 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 FIG4Q92562 907 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 ATP6V1E2Q96A05 226 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 APIPQ96GX9 242 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 C18orf12Q96KH6 178 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 WFIKKN1Q96NZ8 548 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 TMEM237Q96Q45 408 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 ADOQ96SZ5 270 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 PAFAH2Q99487 392 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 ACPTQ9BZG2 426 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 RAB17Q9H0T7 212 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 BRF2Q9HAW0 419 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 TAS2R10Q9NYW0 307 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 C6orf203Q9P0P8 240 aaPredicted RBP8.09□□□□□ -1.11
TPM3-201ENST00000271850 DMGDHQ9UI17 866 aaKnown RBP8.09□□□□□ -1.11
TPM3-201ENST00000271850 FBN1P35555 2871 aaKnown RBP8.09□□□□□ -1.11
TPM3-201ENST00000271850 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
TPM3-201ENST00000271850 H0Y3Z8 333 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 MANBAO00462 879 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 ERN1O75460 977 aaKnown RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 PSMG1O95456 288 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 RBP1P09455 135 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 INHBBP09529 407 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 KRT15P19012 456 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 GRK2P25098 689 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 HSD17B3P37058 310 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 ARL1P40616 181 aaPredicted RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 KIR2DL2P43627 348 aaPredicted RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 ALDH9A1P49189 494 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 RPP38P78345 283 aaKnown RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 PSG6Q00889 435 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 IFT88Q13099 833 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 RCAN2Q14206 197 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 TTC19Q6DKK2 380 aaPredicted RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 KLC3Q6P597 504 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 PAGE2Q7Z2X7 111 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 IFNEQ86WN2 208 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 KIF18BQ86Y91 864 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 CDYL2Q8N8U2 506 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 IGFBPL1Q8WX77 278 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 SMPDL3BQ92485 455 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 EFHD2Q96C19 240 aaPredicted RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 COX4I2Q96KJ9 171 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 ZFP3Q96NJ6 502 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 COL21A1Q96P44 957 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 KCNA7Q96RP8 456 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 NPAS1Q99742 590 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 KLHDC3Q9BQ90 382 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 YIPF4Q9BSR8 244 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 OPN3Q9H1Y3 402 aaPredicted RBP8.08□□□□□ -1.12
TPM3-201ENST00000271850 ELOVL6Q9H5J4 265 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 FOLH1BQ9HBA9 442 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 MCM8Q9UJA3 840 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 UTS2RQ9UKP6 389 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 DLGAP4Q9Y2H0 992 aa8.08□□□□□ -1.12
TPM3-201ENST00000271850 GOLGA6L10A6NI86 522 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 KIAA1324LA8MWY0 1029 aaPredicted RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 SHISA8B8ZZ34 492 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 TRIM49D1C9J1S8 452 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 UBFD1O14562 309 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 CTIFO43310 598 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 FADS1O60427 444 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 DLX3O60479 287 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms