RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 HACD4Q5VWC8 232 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CDH26Q8IXH8 852 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 HJURPQ8NCD3 748 aaPredicted RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 WDR20Q8TBZ3 569 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CHFRQ96EP1 664 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 LRRC46Q96FV0 321 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 SLC38A3Q99624 504 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CHIAQ9BZP6 476 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 TMEM38AQ9H6F2 299 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 BEX1Q9HBH7 125 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 PLCL2Q9UPR0 1127 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 TP53BP1Q12888 1972 aaPredicted RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 IGLV3-16A0A075B6K0 115 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 TRAV20A0A0B4J274 112 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 A0A1B0GVC2 190 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 PQLC2LA1A4F0 135 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 ZNF840PA6NDX5 716 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 A6NIN4 97 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 H0YIV9 168 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 GFYI3L273 518 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 GABRPO00591 440 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CLDN7O95471 211 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 KLKB1P03952 638 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 RBMS1P29558 406 aaKnown RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 RFX3P48380 749 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 PNLIPRP1P54315 467 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 IRF8Q02556 426 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 DUSP4Q13115 394 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 SLC36A2Q495M3 483 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 COX20Q5RI15 118 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 ATXN7L2Q5T6C5 722 aaPredicted RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 ADGRG2Q8IZP9 1017 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 TOMM5Q8N4H5 51 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 OXR1Q8N573 874 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CELF5Q8N6W0 485 aaKnown RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 ADAMTS19Q8TE59 1207 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 MRPS24Q96EL2 167 aaKnown RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 BHLHE41Q9C0J9 482 aaPredicted RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 EVA1AQ9H8M9 152 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 SEMA3GQ9NS98 782 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 NLGN3Q9NZ94 848 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 NDRG3Q9UGV2 375 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 KCNK7Q9Y2U2 307 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
NUP54-201ENST00000264883 OR51B4Q9Y5P0 310 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 C2orf92A0A1B0GVN3 265 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 D6RAR5 112 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 GJB5O95377 273 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 HPXP02790 462 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 HLA-DPB1P04440 258 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 GLAP06280 429 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 EIF4EP06730 217 aaKnown RBP12.35□□□□□ -0.43
NUP54-201ENST00000264883 SDHBP21912 280 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 CCR7P32248 378 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 ACSL1P33121 698 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 HNF1BP35680 557 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 SOX18P35713 384 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 RPL3P39023 403 aaKnown RBP12.35□□□□□ -0.43
NUP54-201ENST00000264883 RAG2P55895 527 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 SYT14P1Q58G82 188 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 XKR6Q5GH73 641 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 SFRP5Q5T4F7 317 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 HIST2H2AA3Q6FI13 130 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 GRHL2Q6ISB3 625 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 MCATQ8IVS2 390 aaKnown RBP12.35□□□□□ -0.43
NUP54-201ENST00000264883 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
NUP54-201ENST00000264883 IQCF1Q8N6M8 205 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 ARIH2OSQ8N7S6 290 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 OR52N2Q8NGI0 321 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 CLCA2Q9UQC9 943 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 SLC22A14Q9Y267 594 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 KIAA0100Q14667 2235 aaKnown RBP12.35□□□□□ -0.43
NUP54-201ENST00000264883 TRBC2A0A5B9 178 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 PLSCR5A0PG75 271 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 HOXA2O43364 376 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 TFP02787 698 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 IFNW1P05000 195 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 GAAP10253 952 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 DHODHQ02127 395 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 INSL4Q14641 139 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 ZNF630Q2M218 657 aaPredicted RBP12.35□□□□□ -0.43
NUP54-201ENST00000264883 CRB2Q5IJ48 1285 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 IL20RBQ6UXL0 311 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 BTN2A1Q7KYR7 527 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 SIAH3Q8IW03 269 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 KLHDC8AQ8IYD2 350 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 RNF175Q8N4F7 328 aa12.35□□□□□ -0.43
NUP54-201ENST00000264883 RPLP0P6Q8NHW5 317 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms