RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 HTR1EP28566 365 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 IL12BP29460 328 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 GPC1P35052 558 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 HPCAL1P37235 193 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 MANFP55145 182 aaKnown RBP20.96■□□□□ 0.95
LSM4-201ENST00000252816 PSPHP78330 225 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 GAB1Q13480 694 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 SP5Q6BEB4 398 aaPredicted RBP20.96■□□□□ 0.95
LSM4-201ENST00000252816 RTL6Q6ICC9 239 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 ZNF585AQ6P3V2 769 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 R3HCC1LQ7Z5L2 792 aaKnown RBP20.96■□□□□ 0.95
LSM4-201ENST00000252816 WDSUB1Q8N9V3 476 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 OR1J4Q8NGS1 313 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 ZFP28Q8NHY6 868 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 RNF138Q8WVD3 245 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 TMCO6Q96DC7 493 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 PPP1R36Q96LQ0 422 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 LMF2Q9BU23 707 aaKnown RBP20.96■□□□□ 0.95
LSM4-201ENST00000252816 TMBIM4Q9HC24 238 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.96■□□□□ 0.95
LSM4-201ENST00000252816 NOTCH2Q04721 2471 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 LAMP1P11279 417 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 ELAVL4P26378 380 aaKnown RBP20.95■□□□□ 0.94
LSM4-201ENST00000252816 KRT20P35900 424 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 PNLIPRP2P54317 469 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 MAGOHP61326 146 aaKnown RBP20.95■□□□□ 0.94
LSM4-201ENST00000252816 BST1Q10588 318 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 STX3Q13277 289 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 EFR3AQ14156 821 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 ZNF630Q2M218 657 aaPredicted RBP20.95■□□□□ 0.94
LSM4-201ENST00000252816 CYP27C1Q4G0S4 372 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 HHATQ5VTY9 493 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 TMEM211Q6ICI0 200 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 KRTCAP2Q8N6L1 136 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 SDCCAG3Q96C92 435 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 TLCD1Q96CP7 247 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 EQTNQ9NQ60 294 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 NTMQ9P121 344 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 HAO1Q9UJM8 370 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 MAPRE3Q9UPY8 281 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 FAM215AQ9Y5M1 114 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 ITPR2Q14571 2701 aa20.95■□□□□ 0.94
LSM4-201ENST00000252816 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 FIGNL2A6NMB9 653 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 CLDN14O95500 239 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 PRPS2P11908 318 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 CYP4B1P13584 511 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 RPL14P50914 215 aaKnown RBP20.94■□□□□ 0.94
LSM4-201ENST00000252816 NUP107P57740 925 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 PMPCAQ10713 525 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 EIPR1Q53HC9 387 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 WLSQ5T9L3 541 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 HOXB13Q92826 284 aaPredicted RBP20.94■□□□□ 0.94
LSM4-201ENST00000252816 GIMAP5Q96F15 307 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 AKTIPQ9H8T0 292 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 SERHLQ9NQF3 203 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 FLRT3Q9NZU0 649 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 CBLCQ9ULV8 474 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 SLC6A5Q9Y345 797 aa20.94■□□□□ 0.94
LSM4-201ENST00000252816 ADGRG4Q8IZF6 3080 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 C15orf38-AP3S2A0A0A6YYH1 394 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 GXYLT2A0PJZ3 443 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 SNUPNO95149 360 aaKnown RBP20.93■□□□□ 0.94
LSM4-201ENST00000252816 G6PDP11413 515 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 GABRA3P34903 492 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 MAP3K8P41279 467 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 PRKAG1P54619 331 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 GAS1P54826 345 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 EMX2Q04743 252 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 TOMM20Q15388 145 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 RIMKLAQ8IXN7 391 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 FAM83FQ8NEG4 500 aaPredicted RBP20.93■□□□□ 0.94
LSM4-201ENST00000252816 MGARPQ8TDB4 240 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 Q9N2J8 555 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 SIRT3Q9NTG7 399 aaPredicted RBP20.93■□□□□ 0.94
LSM4-201ENST00000252816 PNPOQ9NVS9 261 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 ALKBH4Q9NXW9 302 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 EIF3LQ9Y262 564 aaKnown RBP20.93■□□□□ 0.94
LSM4-201ENST00000252816 WIF1Q9Y5W5 379 aa20.93■□□□□ 0.94
LSM4-201ENST00000252816 CACNA1CQ13936 2221 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 C17orf51A8MQB3 221 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 B4DXG7 233 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 WDR1O75083 606 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 GLI4P10075 376 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 RPL3P39023 403 aaKnown RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 CRYZQ08257 329 aaKnown RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 CASP8Q14790 479 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 MLC1Q15049 377 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 ZNHIT3Q15649 155 aaPredicted RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 WIPI1Q5MNZ9 446 aaPredicted RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 CPTPQ5TA50 214 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 YRDCQ86U90 279 aaKnown RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 CCDC71Q8IV32 467 aaPredicted RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 NUP43Q8NFH3 380 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 RND1Q92730 232 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 COQ8BQ96D53 544 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 TIMP4Q99727 224 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 TTYH2Q9BSA4 534 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 ASIC5Q9NY37 505 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 COQ3Q9NZJ6 369 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms