RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 LHX9Q9NQ69 397 aa11.85□□□□□ -0.51
RAB3IP-201ENST00000247833 CA5BQ9Y2D0 317 aa11.85□□□□□ -0.51
RAB3IP-201ENST00000247833 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
RAB3IP-201ENST00000247833 CACNB4O00305 520 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PRODHO43272 600 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 CLEC3AO75596 197 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 SLC2A10O95528 541 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 GKN3PP0CG01 181 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 MYL9P24844 172 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PCBP4P57723 403 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PSPHP78330 225 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 LCN1P1Q5VSP4 162 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 ARL9Q6T311 187 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 OR2A1Q8NGT9 310 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PHF21AQ96BD5 680 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 LINC00615Q96LM1 132 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 SAMD8Q96LT4 415 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 OR2A14Q96R47 310 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 KXD1Q9BQD3 176 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 MED20Q9H944 212 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 TNFRSF10DQ9UBN6 386 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 STON1Q9Y6Q2 735 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PLXND1Q9Y4D7 1925 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 A0A1W2PRQ8 180 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 A8MVJ9 347 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 H3BQ06 376 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 EMC8O43402 210 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PIP5K1CO60331 668 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 HPGDSO60760 199 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 ATP5A1P25705 553 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 AHRP35869 848 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 GJA8P48165 433 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 EPHA5P54756 1037 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 KRT74Q7RTS7 529 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 CPOQ8IVL8 374 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 Q8N402 240 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 SLC16A11Q8NCK7 471 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 TTLQ8NG68 377 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 OR52L1Q8NGH7 329 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 GRHL3Q8TE85 626 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 RFKQ969G6 155 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 SLC25A19Q9HC21 320 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 MOV10Q9HCE1 1003 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 TBC1D24Q9ULP9 559 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 N6AMT1Q9Y5N5 214 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 CDH23Q9H251 3354 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 CXorf51AA0A1B0GTR3 108 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 HOXC11O43248 304 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 REM1O75628 298 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 UBXN7O94888 489 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 ACADMP11310 421 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PIPP12273 146 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 NT5EP21589 574 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 ACTR1BP42025 376 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 ACTR1AP61163 376 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 DUSP2Q05923 314 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 RGS1Q08116 209 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 TANGO2Q6ICL3 276 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PLBD1Q6P4A8 553 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 CNIH2Q6PI25 160 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 ENPP7Q6UWV6 458 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 PEX5LQ8IYB4 626 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 IL17RDQ8NFM7 739 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 GNPDA2Q8TDQ7 276 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 HCAR2Q8TDS4 363 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 NECTIN4Q96NY8 510 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 TMEM246Q9BRR3 403 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 C11orf54Q9H0W9 315 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 C6orf106Q9H6K1 298 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 DDX31Q9H8H2 851 aaKnown RBP11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 NDUFB11Q9NX14 153 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 NLKQ9UBE8 527 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 CHD7Q9P2D1 2997 aa11.84□□□□□ -0.51
RAB3IP-201ENST00000247833 A0A075B6Q4 140 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 OR6C70A6NIJ9 312 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 PXNP49023 591 aaPredicted RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 STXBP1P61764 594 aaKnown RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 TEKQ02763 1124 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 C12orf73Q69YU5 71 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 PAMR1Q6UXH9 720 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 GDPGP1Q6ZNW5 385 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 NANOGNBQ7Z5D8 188 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 GLCCI1Q86VQ1 547 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 KLHL36Q8N4N3 616 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 BBS1Q8NFJ9 593 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 TMEM163Q8TC26 289 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 CDS1Q92903 461 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 RSPO3Q9BXY4 272 aaPredicted RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 DPH1Q9BZG8 443 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 HOXD1Q9GZZ0 328 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 ZNF624Q9P2J8 865 aaPredicted RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 DIMT1Q9UNQ2 313 aaKnown RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 ZFR2Q9UPR6 939 aaKnown RBP11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 SLC27A6Q9Y2P4 619 aa11.83□□□□□ -0.51
RAB3IP-201ENST00000247833 TCF20Q9UGU0 1960 aaKnown RBP11.83□□□□□ -0.52
RAB3IP-201ENST00000247833 COL4A6Q14031 1691 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms