RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 RNF165Q6ZSG1 346 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 NKAPQ8N5F7 415 aaKnown RBP12.27□□□□□ -0.44
MSH2-201ENST00000233146 OR8J1Q8NGP2 316 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 IFT27Q9BW83 186 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 SMAD6O43541 496 aaKnown RBP12.27□□□□□ -0.45
MSH2-201ENST00000233146 LDB2O43679 373 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.45
MSH2-201ENST00000233146 OTCP00480 354 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 OR8U8P0C7N1 319 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 GAS1P54826 345 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 ACVR1Q04771 509 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 DYRK1AQ13627 763 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.45
MSH2-201ENST00000233146 GTF2H2Q13888 395 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 PEA15Q15121 130 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 AFMIDQ63HM1 303 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 GTF2H2CQ6P1K8 395 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 IL20RBQ6UXL0 311 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 RGL4Q8IZJ4 473 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 CPXCR1Q8N123 301 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 SAMD12Q8N8I0 201 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 ZFP41Q8N8Y5 198 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 OR10H5Q8NGA6 315 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 REEP4Q9H6H4 257 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 PPP4R1LQ9P1A2 415 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 OR12D3Q9UGF7 316 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 ARRDC5A6NEK1 342 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 RBBP9O75884 186 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 NFATC1O95644 943 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 HLA-DPB1P04440 258 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 NOS3P29474 1203 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 AQP1P29972 269 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 OR1E2P47887 323 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 RBP2P50120 134 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.45
MSH2-201ENST00000233146 ZNF770Q6IQ21 691 aaPredicted RBP12.27□□□□□ -0.45
MSH2-201ENST00000233146 H3F3CQ6NXT2 135 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 MSANTD1Q6ZTZ1 278 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 ARHGAP12Q8IWW6 846 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 NELL1Q92832 810 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 PBX4Q9BYU1 374 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 LMAN2LQ9H0V9 348 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 THSD1Q9NS62 852 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 ZNF629Q9UEG4 869 aaPredicted RBP12.27□□□□□ -0.45
MSH2-201ENST00000233146 DLGAP4Q9Y2H0 992 aa12.27□□□□□ -0.45
MSH2-201ENST00000233146 C2orf92A0A1B0GVN3 265 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 J3KTA2 159 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 TCAPO15273 167 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 PPIHO43447 177 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 HCRTO43612 131 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 AGAP20933 346 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ITGA3P26006 1051 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 PAX6P26367 422 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ABCD3P28288 659 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 THBS2P35442 1172 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 CXCR3P49682 368 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 MMP15P51511 669 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 DGCR2P98153 550 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 INSL4Q14641 139 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 TMEM132DQ14C87 1099 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 HEPACAMQ14CZ8 416 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 HBMQ6B0K9 141 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 NCEH1Q6PIU2 408 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 GLDNQ6ZMI3 551 aaPredicted RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 TCEANCQ8N8B7 351 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 BRI3BPQ8WY22 251 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 LRR1Q96L50 414 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 GPR21Q99679 349 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 C2orf88Q9BSF0 95 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 TLNRD1Q9H1K6 362 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 CHST8Q9H2A9 424 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 IPPKQ9H8X2 491 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 NMNAT1Q9HAN9 279 aaPredicted RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 GDE1Q9NZC3 331 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 KRT33AO76009 404 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 UBBP0CG47 229 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 UBCP0CG48 685 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 PPT1P50897 306 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 STC1P52823 247 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 RPS27AP62979 156 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 UBA52P62987 128 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 IFI44LQ53G44 452 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 RPL13AP3Q6NVV1 102 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ZCCHC12Q6PEW1 402 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 HFE2Q6ZVN8 426 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 CA5BP1Q8WTZ4 195 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 SNX33Q8WV41 574 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 TMED9Q9BVK6 235 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 FXYD6-FXYD2A0A087WZ82 144 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 A0A1W2PRB8 838 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 METTL21EPA6NDL7 271 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 UBXN7O94888 489 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms